FastQCFastQC Report
Tue 7 May 2024
EGAF00007822629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3843
Total Bases580.2 kbp
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCG1473.825136612021858No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCT1273.304709862086911No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1102.862347124642207No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC581.5092375748113454No Hit
ATTGCGCAATGATCCCCCAGGGGGCCCATCGAACCATTATCATGACTCAG350.9107468123861567No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG350.9107468123861567No Hit
ATTGCGCAATGCACAACCCGGGGATAATATGAAAGATATATTTCGTGTGT310.8066614623991674No Hit
ATTGCGCAATGTGGACGGTGGGGACACAACATGGGTTTTTCTGACGGTGA300.78064012490242No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGAT250.6505334374186833No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATG240.624512099921936No Hit
ATTGCGCAATGAACCCACGGGACGGAATGAATATCTTGTTTCAATTCTGG230.5984907624251886No Hit
ATTGCGCAATGGCTTAGACGGGGGGCGGCGGAAGCGGCGGCGGTAGCTCG220.5724694249284413No Hit
ATTGCGCAATGAAGGCGGGGGGAGATAAAAGAATAGTTAAGGAAAATGGG220.5724694249284413No Hit
ATTGCGCAATGCATGCGGGGGGAAGACCTGTGCCAGCTGTGGCTACCCAT210.546448087431694No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA180.468384074941452No Hit
ATTGCGCAATGAGGCGAAGGGGTCTTCTAGCCCAGTGATCAGTCATGGCA170.44236273744470467No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAC170.44236273744470467No Hit
ATTGCGCAATGAAGCCAGGGGGATCTACACTGATGCCAGCATCTTTGACG160.4163413999479573No Hit
ATTGCGCAATGGTCCTTGGGGGAAGATTGCCAAGGACCTCGGCCCTGTCG140.36429872495446264No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT140.36429872495446264No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA130.33827738745771535No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC130.33827738745771535No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT130.33827738745771535No Hit
ATTGCGCAATGGGTCAGGTGGGGGGCGGCGGAAGCGGCGGCGGTAGCTCG130.33827738745771535No Hit
ATTGCGCAATGGCTCCTTAGGGAAGAAACCGAGAAAAATCAAAAAATTTA130.33827738745771535No Hit
ATTGCGCAATGGTCCGACCGGGATGTTCGGCAAGGTGTACAAGGGTGGTT120.312256049960968No Hit
ATTGCGCAATGGCAACATCGGGAAGGAAGGTGGCAGCGACGACAACGGTG120.312256049960968No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT110.28623471246422066No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG110.28623471246422066No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCG100.2602133749674733No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG90.234192037470726No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT80.20817069997397866No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC70.18214936247723132No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC70.18214936247723132No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT70.18214936247723132No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACT70.18214936247723132No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCAGGAGACCCACTTATGGATCG70.18214936247723132No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTGATGGATCG70.18214936247723132No Hit
ATTGCGCAATGGTCAGATAGGGTCATCGAAGGACAAAAGTGCTGCCGCGC70.18214936247723132No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC70.18214936247723132No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT60.156128024980484No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAC60.156128024980484No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGAGCT60.156128024980484No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCA60.156128024980484No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCGCG60.156128024980484No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA60.156128024980484No Hit
ATTGCGCAATGAAGGTTCCGGGGGGGTGCAGTGACTTGCCCAAGGTCACA60.156128024980484No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT60.156128024980484No Hit
ATTGCGCAATGGATCCTCCGGGATGGAACTGGTACATGTAGTTGAGGGCT60.156128024980484No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACGTATGGATCG60.156128024980484No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGGTG60.156128024980484No Hit
ATTGCGCAATGATTAGGACGGGATAAAAGATCGGATATGATCGTCGTGAA50.13010668748373666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGG50.13010668748373666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC50.13010668748373666No Hit
ATTGCGCAATGATCTCGCCGGGATGTGACTGGCGGCGTGTACATGCAGTA50.13010668748373666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTCT50.13010668748373666No Hit
ATTGCGCAATGCTCTCGCCGGGATGTGACTGGCGGCGTGTACATGCAGTA50.13010668748373666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGT50.13010668748373666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG50.13010668748373666No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.13010668748373666No Hit
ATTGCGCAATGGTAGTTCTGGGAGCTCGTTACGCCCTTATCATCGATGAC50.13010668748373666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTG50.13010668748373666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC50.13010668748373666No Hit
ATTGCGCAATGTTAACCGGGGGAGGGAACCAGGACCTTTACTTTGAAAAA50.13010668748373666No Hit
ATTGCGCAATGCATCCTCCGGGATGTGAAGATGAGCTGCGAGGCATGCTC50.13010668748373666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGGT40.10408534998698933No Hit
ATTGCGCAATGCCATCGGTGGGATTTGATATCCCTTGTTACGGACCCAAA40.10408534998698933No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGT40.10408534998698933No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG40.10408534998698933No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC40.10408534998698933No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGAGCG40.10408534998698933No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGGCTGTC40.10408534998698933No Hit
ATTGCGCAATGGATACTCGGGGATTATCGCGTCGTGATATGAATGTTCGT40.10408534998698933No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGATG40.10408534998698933No Hit
ATTGCGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGG40.10408534998698933No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA40.10408534998698933No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)