FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822631

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822631
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14210
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCGATAACTATCG6244.391273750879662No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC5103.589021815622801No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCGATAACTATCT4152.920478536242083No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3452.4278676988036594No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1511.0626319493314567No Hit
ATTGCGCAATGTGAAGCCTGGGGCTGCATGATCTTGGGGCAGTGACTCAC1100.7741027445460943No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCGATAAC730.513722730471499No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG700.49261083743842365No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCGATAACTAT680.47853624208304013No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTCCGATAACTATCG520.36593947923997183No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC520.36593947923997183No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCG450.3166783954961295No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT440.30964109781843774No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT380.2674173117522871No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT380.2674173117522871No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG350.24630541871921183No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT300.211118930330753No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC280.19704433497536944No Hit
ATTGCGCAATGATGGTTCCGGGGAAGAGTGGTCAGAACAGAGCCTTTGAT270.19000703729767768No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCGA250.17593244194229415No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC240.1688951442646024No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC230.1618578465869106No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG230.1618578465869106No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT220.15482054890921887No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT220.15482054890921887No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA220.15482054890921887No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGCT210.1477832512315271No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG210.1477832512315271No Hit
ATTGCGCAATGATTTACAAGGGAACGACGATATGCTTTGGGTAGCTGTAA210.1477832512315271No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTCCGATAACTATCGCG200.14074595355383532No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC190.13370865587614356No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTCCGATAACTATCT180.1266713581984518No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC180.1266713581984518No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG180.1266713581984518No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGT180.1266713581984518No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCC170.11963406052076003No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC160.11259676284306826No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT160.11259676284306826No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTCT150.1055594651653765No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGG150.1055594651653765No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT150.1055594651653765No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG150.1055594651653765No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)