FastQCFastQC Report
Wed 8 May 2024
EGAF00007822648

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822648
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences912325
Total Bases137.7 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG42170.4622256323130463No Hit
GGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGG16650.18250075356917767No Hit
GAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGGG13480.14775436385060148No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT12420.1361356972570082No Hit
GTATTACTATGAAGAAGATTATTACAAATGCATGGGCTGTGACGATAACG10700.11728276655797003No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)