FastQCFastQC Report
Tue 7 May 2024
EGAF00007822657

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822657
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3906
Total Bases589.8 kbp
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCG942.406554019457245No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC922.355350742447517No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCT832.124935995903738No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC451.1520737327188941No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG300.7680491551459293No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGAT270.6912442396313364No Hit
ATTGCGCAATGGTCGGTGTGGGGGGTGATAGCCCCGTACACGTAGAACAC240.6144393241167435No Hit
ATTGCGCAATGCTTTCCGGGCTCAGTTTCTACTCTTGGCTTCCGCTCTCC220.5632360471070148No Hit
ATTGCGCAATGACCACGATGGGGGACCACAAACTTCGGGTACTCATCTCA210.5376344086021506No Hit
ATTGCGCAATGCATGGATGGGGTAAAACACCAACCGCTGATTCAAAGGAG210.5376344086021506No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAC210.5376344086021506No Hit
ATTGCGCAATGTCATCACCGGGAAGTGCGACCGGCTCCCACGCTCTCAGA210.5376344086021506No Hit
ATTGCGCAATGGGCTCCAGGGGGGCCCCGACTTCCGCATTTTGCTTGCTC200.5120327700972862No Hit
ATTGCGCAATGTAACGCAGGGGCAGCATTTACCTGCGCAAGGAGCTGACG190.48643113159242196No Hit
ATTGCGCAATGCATTGTACGGGCAATCGCTGAAAAAGAGTGCGACCCCAA180.4608294930875576No Hit
ATTGCGCAATGCCATAGGGGGGCTGGTGAACTTGTGACAACGACACATCG170.4352278545826933No Hit
ATTGCGCAATGCTTGGTACGGGCGAAGAATATCACGCACAGCGGCAACAT170.4352278545826933No Hit
ATTGCGCAATGGAGGGCATGGGGAGGATTGCCCTGCTGGTAACATCTTGG160.409626216077829No Hit
ATTGCGCAATGTCAGCACAGGGCCGAAGATGACGAAGGGTACGACGTCTA160.409626216077829No Hit
ATTGCGCAATGTCTTCTGGGGGTGGAAGGGGTGTATTTATTAGATAAAAA160.409626216077829No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA150.38402457757296465No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC140.35842293906810035No Hit
ATTGCGCAATGGACCTCGAGGGCCATAAGGTAGGTATTGCAACAAATACA140.35842293906810035No Hit
ATTGCGCAATGGACTTTGGGGGCGCGGTTGGATAAAAGAGAACGCTCTCG140.35842293906810035No Hit
ATTGCGCAATGGGCAACAGGGGCGGGTGTGCAAAAGCTGCTCCAGGACTA140.35842293906810035No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATG130.33282130056323606No Hit
ATTGCGCAATGAGGTCTTTGGGAGCCTAGAGCGATACGATACATATCATC130.33282130056323606No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG120.30721966205837176No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT120.30721966205837176No Hit
ATTGCGCAATGTTGTGGATGGGATGAGCTTGTTGACGTGATTGGTGTGAC110.2816180235535074No Hit
ATTGCGCAATGAGATTACCGGGGTGAGTATGCTGAAGTGTGAGTGCTAAT110.2816180235535074No Hit
ATTGCGCAATGCTACGCTGGGGCTAAAGTTTGCCTTTATTGACGAACGTT110.2816180235535074No Hit
ATTGCGCAATGGCGGGCATGGGGAGGATTGCCCTGCTGGTAACATCTTGG100.2560163850486431No Hit
ATTGCGCAATGTATTTTGGGGCAAGATCTTTGGCACGTACGAAAGTGCTT100.2560163850486431No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT90.2304147465437788No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT90.2304147465437788No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC80.2048131080389145No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG80.2048131080389145No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCA80.2048131080389145No Hit
ATTGCGCAATGGACATCAGGGGCATTGATGAATTCACGCAAGCAGCTTCG80.2048131080389145No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC80.2048131080389145No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG70.17921146953405018No Hit
ATTGCGCAATGCCCGGAGAGGGATTGAGGGCGCATGGTGGATGCCTTGGC70.17921146953405018No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC70.17921146953405018No Hit
ATTGCGCAATGTGTGTTCTGGGCCAAAAATGCTTGATTTTCCATGTATCC70.17921146953405018No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG70.17921146953405018No Hit
ATTGCGCAATGTCAGGGAGGGGGGCAACAAGCTTTGATCCGGTAATGTCC70.17921146953405018No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT70.17921146953405018No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG70.17921146953405018No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA70.17921146953405018No Hit
ATTGCGCAATGGATGGGATGGGCAAGCTGGAGCAAGAGCGAGTCGAGCAG60.15360983102918588No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCGCG60.15360983102918588No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACT60.15360983102918588No Hit
ATTGCGCAATGGAGGTGACGGGCAGAGACCAATGGAGTCGATGTGGAAGA50.12800819252432155No Hit
ATTGCGCAATGCAGGCCGCGGGCACTGTTCAGCAGCGTGAATTCCTTTCG50.12800819252432155No Hit
ATTGCGCAATGGAGTTTTGGGGCAGGGTACTCAAGCATATGTCCTGGAGC50.12800819252432155No Hit
ATTGCGCAATGGCAGGAATGGGGGATTTAATCTTGGGTTCTATCGAGACA50.12800819252432155No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGGCT50.12800819252432155No Hit
ATTGCGCAATGCATTGGCCGGGGGACGTTCGAGCAGCTTGGCTGGGAGAA50.12800819252432155No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGATG50.12800819252432155No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT50.12800819252432155No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT50.12800819252432155No Hit
ATTGCGCAATGGGCGTGGAGGGGGGTGAGTTCTCTGAGGCCCGTGAGGAC50.12800819252432155No Hit
ATTGCGCAATGTTCCAGGAGGGATTTAACAACGTGTCTCATTGTGCTTTT50.12800819252432155No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC50.12800819252432155No Hit
ATTGCGCAATGGACAGCACGGGGAGAAGGAGCAGCTGTAAATGAAGTGGT50.12800819252432155No Hit
ATTGCGCAATGCATTCGAGGGGCAGCTGCACAGCTGGCTGCTGGCGGTGC50.12800819252432155No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT50.12800819252432155No Hit
ATTGCGCAATGGTCATGACGGGGCCTCTCGGTCTTAGCGCCATCTTCCTT40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGCT40.10240655401945725No Hit
ATTGCGCAATGATTTAGGCGGGAAGGAGTGAATATAATAAGATGAGAAAT40.10240655401945725No Hit
ATTGCGCAATGTATAGCACGGGCAAGACCAAGGAGGTTTGCATTAGCGAC40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCGG40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGG40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC40.10240655401945725No Hit
ATTGCGCAATGGCAAGAAGGGGAATATCTATGGCAATATCGAGGACCTGG40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGGTGCCT40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT40.10240655401945725No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACGTATGGATCT40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTCT40.10240655401945725No Hit
ATTGCGCAATGTTATCGATGGGCAAGGATGTTGTCATTGCGCATGAGTGG40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTTA40.10240655401945725No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCAGGAGACCCACTTATGGATCT40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGC40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCGGTC40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTT40.10240655401945725No Hit
ATTGCGCCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCA40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTATGGCTGT40.10240655401945725No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCG40.10240655401945725No Hit
ATTGCGCAATGGTTGGGACGGGATGATCCCTGGCAAGTTTGTGTCGGGCA40.10240655401945725No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)