FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007822663

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822663
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11229
Sequences flagged as poor quality0
Sequence length151
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC5334.746638169026627No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCACGGTACAATCG5334.746638169026627No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCACGGTACAATCT4083.633449104995993No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3573.1792679668714934No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1070.9528898388102235No Hit
ATTGCGCAATGCAACACCAGGGGGTTCCAGGAAATAGCCCCTCCATTATA1020.9083622762489982No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCACGGTAC990.8816457387122629No Hit
ATTGCGCAATGGACGTTGTGGGGCTGGAGGTATCAGAAGTGCGAATGCTG790.7035354884673612No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCACGGTACAAT670.5966693383204204No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG570.5076142131979695No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT550.48980318817347934No Hit
ATTGCGCAATGGACGAGAAGGGCATAACCTACGTTCACTGAGTTCGAGAC510.4541811381244991No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC470.4185590880755188No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT440.39184255053878353No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT420.37403152551429336No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG420.37403152551429336No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGCACGGTACAATCG350.3116929379285778No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGCAC350.3116929379285778No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCACG330.2938819129040876No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT320.2849764003918425No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC320.2849764003918425No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC310.27607088787959744No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA270.24044883783061713No Hit
ATTGCGCAATGCGTATTCAGGGGGGCTGGTGAGATGGCTCAGTGGGTTAG270.24044883783061713No Hit
ATTGCGCAATGAGGGGCCGGGGGTTCCAGGAAATAGCCCCTCCATTATAG260.2315433253183721No Hit
ATTGCGTAATGCATGGAATGGGGCGTGAAAAAAAAATAGAGGAAGACAAA240.21373230029388193No Hit
ATTGCGCAATGATCCCCGCGGGCTCTGACGACAAGAGCGGTCAAGACAAC230.20482678778163685No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGT210.18701576275714668No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC190.1692047377326565No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG190.1692047377326565No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACGCACGGTA190.1692047377326565No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG190.1692047377326565No Hit
ATTGCGCAATGCATGGAATGGGGCGTGAAAAAAAAATAGAGGAAGACAAA190.1692047377326565No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA180.16029922522041143No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG180.16029922522041143No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA180.16029922522041143No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC170.15139371270816634No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT170.15139371270816634No Hit
ATTGCGCAATGGTTTAGGAGGGGGCGGCGACGACCCATTCGAACGTCTGC160.14248820019592126No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC160.14248820019592126No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCACGGTACAATGG160.14248820019592126No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGCACGGTACAATCT150.13358268768367618No Hit
ATTGCGAAATGCATGGAATGGGGCGTGAAAAAAAAATAGAGGAAGACAAA150.13358268768367618No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT150.13358268768367618No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCACGGTACAAGCT150.13358268768367618No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA140.1246771751714311No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT140.1246771751714311No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGCACGGTACAAGCG140.1246771751714311No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC130.11577166265918605No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACGCACGGTACAATCTCG130.11577166265918605No Hit
ATTGCGCAATGTGTGTCCCGGGGAAGGACGCGATAAGCTGCGAAAAGCTG120.10686615014694097No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTGA120.10686615014694097No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG120.10686615014694097No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)