FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007822696

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822696
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences206363
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAAAGTACGAGAGTGTA5190.25149857290308825No Hit
GAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGGG2910.14101365070288763No Hit
GGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGG2660.12889907590023406No Hit
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT2360.11436158613704976No Hit
GTATTACTATGAAGAAGATTATTACAAATGCATGGGCTGTGACGATAACG2340.11339242015283749No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)