FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822769

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822769
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3148
Sequences flagged as poor quality0
Sequence length151
%GC67

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC35111.149936467598476No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1033.2719186785260486No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG310.9847522236340533No Hit
ATTGCGCAATGCGCCCCTAGGGGGAGATGATTAGTTTGGATAAACAAAAA110.34942820838627703No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG90.28589580686149935No Hit
ATTGCGCAAACTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC90.28589580686149935No Hit
ATTGCGCAATGGGTGGAGGGGGGCTAGTAGGGAATGTAAGGTAGGCTTAG80.25412960609911056No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.22236340533672172No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC70.22236340533672172No Hit
ATTGCGCAATGGGGTTTTCGGGGGGTGAGTGTGTGAACCGATCATGTAGT60.1905972045743329No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTATCTTATACACATCTCCGAGC60.1905972045743329No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.1905972045743329No Hit
ATTGCGCAATCTGGCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC50.1588310038119441No Hit
ATTGCGCAATCTGACTCTTATACACCTGTCTCTTATACACATCTCCGAGC50.1588310038119441No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.1588310038119441No Hit
GGGCGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.12706480304955528No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA40.12706480304955528No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.12706480304955528No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCGTATACACATCTCCGAGC40.12706480304955528No Hit
ATTGCGCAATGGAGCACGGGGGGCCCTTTCCTCAGCTGCCGCCAAGGTGC40.12706480304955528No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCA40.12706480304955528No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)