FastQCFastQC Report
Tue 7 May 2024
EGAF00007822775

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822775
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7071
Total Bases1 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2393.38000282845425No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCG1612.2769056710507707No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1552.1920520435581956No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCT1311.8526375335878944No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG530.7495403761844153No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTCGGAGATCG510.7212558336868901No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA430.6081176636967898No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAT380.5374063074529769No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGAT280.39598359496535146No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGA270.3818413237165889No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTCGGAGATCT260.3676990524678263No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC250.3535567812190638No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT230.3252722387215387No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC230.3252722387215387No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT220.3111299674727761No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGTAGGAGATCG210.2969876962240136No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG210.2969876962240136No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGTAGGAGATCT200.282845424975251No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA180.2545608824777259No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC180.2545608824777259No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT180.2545608824777259No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAT160.2262763399802008No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT160.2262763399802008No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCA150.21213406873143828No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC140.19799179748267573No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC140.19799179748267573No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG140.19799179748267573No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG140.19799179748267573No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATT130.18384952623391315No Hit
ATTGCGCAATGAAGGCCCGGGGGACAATACCCTTTTTCTTCAATCTTCAA130.18384952623391315No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT110.15556498373638805No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC110.15556498373638805No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGG100.1414227124876255No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG100.1414227124876255No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT100.1414227124876255No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTT100.1414227124876255No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGT90.12728044123886295No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG90.12728044123886295No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTTA90.12728044123886295No Hit
ATTGCGCAATGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATT90.12728044123886295No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG80.1131381699901004No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCT80.1131381699901004No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC80.1131381699901004No Hit
ATTGCGCAATGAACAGGCCGGGTACAGTGGCTCGCACCTGTAATCCTAGC80.1131381699901004No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGC80.1131381699901004No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCT80.1131381699901004No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)