FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007822798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences237108
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATACTTCCTGGGTGTA6590.2779324189820672No Hit
GAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGGG4470.18852168632015792No Hit
GTATTACTATGAAGAAGATTATTACAAATGCATGGGCTGTGACGATAACG4250.17924321406278995No Hit
GGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGG3920.16532550567673804No Hit
GGGTATTACTATGAAGAAGATTATTACAAATGCATGGGCTGTGACGATAA2950.1244158779965248No Hit
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT2870.12104188808475462No Hit
GGACTAGGATGATGGCGGGCAGGATAGTTCAGACGGTTTCTATTTCCTGA2710.1142939082612143No Hit
CTATAGCAGATGCGAGCAGGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAG2430.10248494357001872No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)