FastQCFastQC Report
Tue 7 May 2024
EGAF00007822809

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822809
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6789
Total Bases1 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2573.7855354249521285No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1662.4451318309029313No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCG1351.9885108263367213No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCT1141.6791869200176759No Hit
ATTGCGCAATGCGCTCAGAGGGGGACCTCTTCCTGCGTTCTCACGGCTCT620.91324200913242No Hit
ATTGCGCAATGATTACGCAGGGAAGAGTACTATGGCAACATATAAACTGA530.780674620709972No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG500.7364854912358226No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA380.5597289733392252No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAT350.5155398438650758No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC340.5008101340403595No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT290.42716158491677714No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGAT290.42716158491677714No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTCGGAGATCG270.3977021652673442No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT240.3535130357931949No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGA230.33878332596847843No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTCGGAGATCT210.30932390631904555No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG190.2798644866696126No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT150.22094564737074682No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA140.20621593754603035No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGTAGGAGATCG140.20621593754603035No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAT140.20621593754603035No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCA140.20621593754603035No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTCT130.1914862277213139No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT120.17675651789659744No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC120.17675651789659744No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG120.17675651789659744No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATGAGGAGATCG120.17675651789659744No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC120.17675651789659744No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC120.17675651789659744No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT120.17675651789659744No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGTAGGAGATCT110.162026808071881No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC110.162026808071881No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGT110.162026808071881No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT100.14729709824716453No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT90.13256738842244808No Hit
ATTGCGCAATGCGCCACAGGGGGGGGGCCCGCGGGGGGGCGGAACTCCCG80.11783767859773163No Hit
ATTGCGCAATGGATGTACCGGGGAGTGCAGCGCAGCCGCGGGGAGCGAGG80.11783767859773163No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC70.10310796877301517No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT70.10310796877301517No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT70.10310796877301517No Hit
ATTGCGCAATATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC70.10310796877301517No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG70.10310796877301517No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTCT70.10310796877301517No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTG70.10310796877301517No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)