FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007822815

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822815
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences83754
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGCGCTTAGAATCG4890.583852711512286No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGCGCTTAGAATCT3570.42624829858872415No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2650.3164027986723022No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1830.2184970270076653No Hit
ATTGCGCAATGATATACATGGGGGGAAGGAGCCCGGCCGCCGCCCGCCGG1510.18028989660195333No Hit
ATTGCGCAATGTTTTTGAGGGGGGAAGACCAGGAAGTTGATCAATCCCGA1340.15999235857391886No Hit
ATTGCGCAATGGTCTCGATGGGGCCCTGTTTTTTGTGCTCCTCCGAGCTC1330.15879838574874036No Hit
ATTGCGCAATGTTACGTTTGGGCATGGGAGAGAGAAGAGTAAGGGGAATG1210.14447071184659838No Hit
ATTGCGCAATGATTTACACGGGATGGCACATGCAGCGCAAGTAGGTCTAC1140.13611290207034887No Hit
ATTGCGCAATGTTTGAGAGGGGGGGGGACAACTGGGTCTTTTGCGGCTGC1140.13611290207034887No Hit
ATTGCGCAATGACGAGGGCGGGGAAGTTGACTTACTGAAGAATGGAGAGA1130.13491892924517038No Hit
ATTGCGCAATGGGACGCACGGGGACTCACGTTGCGGCCTTCCTCGCGTCA1110.13253098359481338No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGCGCTTAG1100.1313370107696349No Hit
ATTGCGCAATGGGTCACCCGGGGAGACTCCTTTCAGCTAAAGGGGAGATC1080.1289490651192779No Hit
ATTGCGCAATGCATCGGTGGGGGAGAGAGCCCCGGAGCCGCGGCGGGAGA1050.12536714664374238No Hit
ATTGCGCAATGCACGGGTAGGGGCTGGAAAAGCGGGGAAAGGTAGAGCGG1020.12178522816820689No Hit
ATTGCGCAATGTACGGGGGAGGTGCTTGTGTGCCTGGTGCGGGAGCTACG1010.12059125534302839No Hit
ATTGCGCAATGTTCTGACTGGGGCTCTCGCCGCGTCGCCGGTGCCTGCGC970.1158153640423144No Hit
ATTGCGCAATGGGGGGAGCGGGTAAGGATTCGGCGGGCAAGCGGGTGTAA940.11223344556677892No Hit
ATTGCGCAATGTATCACCAGGGGAGATCGCCGAAGCGTCGGACTACCGTT930.11103947274160039No Hit
ATTGCGCAATGCGGTGGCCGGGGTCGCGGCCGTGGACGGGGCCGGGGCCG920.10984549991642191No Hit
ATTGCGCAATGTATTCGTTGGGGCCCTTTTCCCACCCCCTAGCGCCGCTG910.10865152709124341No Hit
ATTGCGCAATGACAGTCCCGGGGGGCGCTGAGAACGCGGGTCCACGCGTG900.1074575542660649No Hit
ATTGCGCAATGCTTATGAGGGGGCTTCCCTTCCCGCGTTCCCCGGGAGAA880.10506960861570791No Hit
ATTGCGCAATGCCTCCGCTGGGGCCCTTTCCCCTGGCTGGCAGCGCGGAG870.1038756357905294No Hit
ATTGCGCAATGCCGGGGAAGGGGCTTTTCCTGTGGCAGCAGCCGGGCTGA870.1038756357905294No Hit
ATTGCGCAATGCCAATAATGGGGCTCTTTCTCAGTGACCGGGTGGTTTGC860.1026816629653509No Hit
ATTGCGCAATGAACTCTCAGGGGGACGCCATGTTTCCTCTTTCGGCCGCG860.1026816629653509No Hit
ATTGCGCAATGATCTGCGAGGGGGACCACAGCCTGTGGCTGGGAAGGGAG850.10148769014017242No Hit
ATTGCGCAATGCTGGTCACGGGGCTCTACCGGCGGGATTTGATGGCGTGA840.1002937173149939No Hit
ATTGCGCAATGTGCCGGAGGGGAGGAATACGAGGCCCATCAAGACCGAGT840.1002937173149939No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)