FastQCFastQC Report
Wed 8 May 2024
EGAF00007822835

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822835
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences255093
Total Bases38.5 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACATGGACGATCG4010.15719757108191915No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACATGGACGATCT2610.10231562606578777No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)