FastQCFastQC Report
Wed 8 May 2024
EGAF00007822845

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822845
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences352752
Total Bases53.2 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCG5240.14854628747675422No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCT4040.11452805370345172No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC4010.11367759785911916No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)