FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822861

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822861
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7345
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3825.200816882232812No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1942.6412525527569777No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCG1451.9741320626276377No Hit
ATTGCGCAATGGGCTTAGTGGGAATAACTCTTTCTCTATTGCAATTCCTG1241.6882232811436353No Hit
ATTGCGCAATGAACAAAGGGGGGGTTCCAGGAAATAGCCCCTCCATTATA951.2933968686181077No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCT791.0755616065350577No Hit
ATTGCGCAATGCGCTCGCGGGGGGGGCGAAACAGGATCGACGAGGGCGTA791.0755616065350577No Hit
ATTGCGCAATGGAATCTCGGGGGAGTGTGTGGGGTTGTGGGGTCGCAGAG660.8985704560925799No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA620.8441116405718176No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG480.6535057862491491No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTCGGAGATCG320.4356705241660994No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAT280.38121170864533693No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGA270.3675970047651464No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG270.3675970047651464No Hit
ATTGCGCAATGACAAGACCGGGGCTGCATGGCTGTCGTCAGCTCGTGTCG270.3675970047651464No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT250.3403675970047651No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT240.32675289312457456No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC240.32675289312457456No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGAT240.32675289312457456No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATT220.2995234853641933No Hit
ATTGCGCAATGCGAGGGCGGGGCTGCACTGCCACCCTGGGCAACTTCGCC210.2859087814840027No Hit
ATTGCGCAATGTTGAGGGGGGGGCTGAGGAGGAGGTGGCCTAGAGCCTTC200.2722940776038121No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTCGGAGATCT190.25867937372362154No Hit
ATTGCGCAATGGTACTCGTGGGGAAAGACATGGCCAACCAAGTGAAGGCA160.2178352620830497No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC160.2178352620830497No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA150.2042205582028591No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC150.2042205582028591No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGTAGGAGATCG140.19060585432266847No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT140.19060585432266847No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT140.19060585432266847No Hit
ATTGCGCAATGGGTGAAGCGGGCCGGCCTATTCATCGGTGTGGCCGTGCT130.17699115044247787No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC130.17699115044247787No Hit
ATTGCGCAATGATGGCTAGGGGGGTTCCAGGAAATAGCCCCTCCATTATA120.16337644656228728No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG110.14976174268209666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC110.14976174268209666No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA110.14976174268209666No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT100.13614703880190604No Hit
ATTGCGCAATGGGATGAGGGGGGGATTGGACTGGCTTCGAAGAGGTTCCA90.12253233492171545No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC90.12253233492171545No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA90.12253233492171545No Hit
ATTGCGCAATGGTGATGCAGGGGGGGATTGGACTGGCTTCGAAGAGGTTC90.12253233492171545No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGTAGGAGATCT80.10891763104152485No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC80.10891763104152485No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC80.10891763104152485No Hit
ATTGCGCAATGTGCAGGGCGGGGGGCTAAACCTAGCCCCAAACCCACTCC80.10891763104152485No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCA80.10891763104152485No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG80.10891763104152485No Hit
ATTGCGCAATGGACCGGGCGGGGGGCTAAACCTAGCCCCAAACCCACTCC80.10891763104152485No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCG80.10891763104152485No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)