FastQCFastQC Report
Wed 8 May 2024
EGAF00007822865

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822865
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91133
Total Bases13.7 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGCCATACTATCG7260.7966378808993448No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGCCATACTATCT6370.6989784161609954No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC4400.4828108369086939No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3140.34455136997574975No Hit
ATTGCGCAATGAGACTCTTGGGGGGTAGCGATGGCGGCTGGGCCGAGTGG1670.18324865855398154No Hit
ATTGCGCAATGCTGCTACCGGGGAGGCTCGCGGCGGGCGCTGGGCGCGGG1640.17995676648414954No Hit
ATTGCGCAATGATCACACCGGGCGGGAAACAGCAGTGATTAACCTTTAGC1560.1711783876312642No Hit
ATTGCGCAATGCCCCTCATTTACATAAATATTATACTAGCATTTACCATC1540.16898379291804286No Hit
ATTGCGCAATGCAGGTTGGGGGGGCCTTGAGTCAGTGCGCCGCTCTCCAG1440.15801081935193617No Hit
ATTGCGCAATGAGGGGCGGTTGGCTTTGTTGGGTGAGCTTGTTTGTGTCC1430.15691352199532552No Hit
ATTGCGCAATGCGAGCTCAGGGGTGCAAGAATAGGAGGTGGAGTGCTGCT1420.15581622463871483No Hit
ATTGCGCAATGGAGAGGGGGGGATCAGAGAAAAAGTCTTTAACTCCACCA1390.15252433256888284No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG1370.1503297378556615No Hit
ATTGCGCAATGGACGGGTCGGGGGCCTTCGCCGCTGGCTCCGTCTGTTGG1360.14923244049905082No Hit
ATTGCGCAATGACAGGACGGGGGGGGCATTCCTGAAGCTGACAGCATTCG1320.14484325107260815No Hit
ATTGCGCAATGATGGCGACGGGCTGATGTTCGCCGACCGTTGACTATTCT1310.1437459537159975No Hit
ATTGCGCAATGCACACATTGGGGATGACCCACCAATCACATGCCTATCAT1290.14155135900277616No Hit
ATTGCGCAATGGTGAGTCGGGGGAGGCCAGACTCCTTTCAGCTAAAGGGG1280.14045406164616547No Hit
ATTGCGCAATGTATGAGGAGGGGGAGGCCGGAGCAGGAACAGGTTGAACA1230.13496757486311214No Hit
ATTGCGCAATGCCGTCTATGGGGATTCCTGAAGCTGACAGCATTCGGGCC1230.13496757486311214No Hit
ATTGCGCAATGCGCAAAGGGGGGATTCCTGAAGCTGACAGCATTCGGGCC1220.1338702775065015No Hit
ATTGCGCAATGCGGCTGATGGGGATTCCTGAAGCTGACAGCATTCGGGCC1210.1327729801498908No Hit
ATTGCGCAATGGATTATGTGGGCTGATGTTCGCCGACCGTTGACTATTCT1190.13057838543666947No Hit
ATTGCGCAATGATGATCGCGGGGATTCCTGAAGCTGACAGCATTCGGGCC1190.13057838543666947No Hit
ATTGCGCAATGTCGGCTCAGGGCTGATGTTCGCCGACCGTTGACTATTCT1160.12728649336683748No Hit
ATTGCGCAATGGATTTCCGGGGGAGTGCGCGCCTAGCAGTGTCCCAGCCG1160.12728649336683748No Hit
ATTGCGCAATGGCCACTGGGGGGGCCGAGAGCTCCGGAGCGCGGCTTCCC1150.12618919601022682No Hit
ATTGCGCAATGGGCTGTGGGGGGGATCTGGCCTTCGACTCGCTATGTCCA1150.12618919601022682No Hit
ATTGCGCAATGCTGTAATGGGGTGGATCAGCGGCTGAAAGCTGCAGAGAA1150.12618919601022682No Hit
ATTGCGCAATGTACACGACGGGCTGATGTTCGCCGACCGTTGACTATTCT1140.12509189865361614No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGCCATAC1140.12509189865361614No Hit
ATTGCGCAATGGCAATGCTGGGGAGATGCACAGGAGGAGAAGCAGGAGCT1130.12399460129700547No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1130.12399460129700547No Hit
ATTGCGCAATGTACTATCCGGGGGGGGCCCTGCGGCGACGACGTCGTCGA1130.12399460129700547No Hit
ATTGCGCAATGGATTTCGAGGGGCTAGTGGCTTGAGGTATCCGCAGGAGC1110.12180000658378413No Hit
ATTGCGCAATGGTTGTACGGGGATTCCTGAAGCTGACAGCATTCGGGCCG1100.12070270922717348No Hit
ATTGCGCAATGATAAGGACGGGGGCTGTAGTGGCTTCGTCTTCGGTTTTT1100.12070270922717348No Hit
ATTGCGCAATGAGCGCCCGGGAGAGTTCAGACCGGAGTAATCCAGGTCGG1090.1196054118705628No Hit
ATTGCGCAATGAAGGTCGAGGGGGACAACTCGGTGGTGGCCACTGCGCAG1090.1196054118705628No Hit
ATTGCGCAATGTTAATCCCGGGGTTGGGGAACTTGGCAGCGGAGTGACTG1090.1196054118705628No Hit
ATTGCGCAATGGTTAGCCCGGGATGACCCCAATACGCAAAATTAACCCCC1090.1196054118705628No Hit
ATTGCGCAATGAGTCGTGTGGGGAACTCGGTGGTGGCCACTGCGCAGACC1080.11850811451395214No Hit
ATTGCGCAATGTGTCATCCGGGGATTCCTGAAGCTGACAGCATTCGGGCC1080.11850811451395214No Hit
ATTGCGCAATGCACTGTTCGGGGATTCCTGAAGCTGACAGCATTCGGGCC1080.11850811451395214No Hit
ATTGCGCAATGAGGTACGTGGGGGCGTGCTGTTGGGAGTTGCTTGGAGGT1050.11521622244412012No Hit
ATTGCGCAATGGTAGCATAGGGATAACCATGCACACTACTATAACCACCC1050.11521622244412012No Hit
ATTGCGCAATGGAGGCAGAGGGGGGGCATTCCTGAAGCTGACAGCATTCG1040.11411892508750947No Hit
ATTGCGCAATGTCTGAGCCGGGGAACTCGGTGGTGGCCACTGCGCAGACC1030.11302162773089879No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGCCATACTAT1030.11302162773089879No Hit
ATTGCGCAATGTATTACAGGGGATGGCCCACCATAATTACCCCCATACTC1020.11192433037428813No Hit
ATTGCGCAATGTATATTAGGGGGAGAAGGAGGGCCAAGATGGCGGAAGCG1020.11192433037428813No Hit
ATTGCGCAATGTTCACCTAGGGCTGATGTTCGCCGACCGTTGACTATTCT1010.11082703301767746No Hit
ATTGCGCAATGATGCAACGGGGGGGTTGGATGTTGTAGGACCGGCGAGGA1010.11082703301767746No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCGC1000.1097297356610668No Hit
ATTGCGCAATGGTTCACGTGGGGGGGCATTCCTGAAGCTGACAGCATTCG1000.1097297356610668No Hit
ATTGCGCAATGTCTGATCAGGGGATTCCTGAAGCTGACAGCATTCGGGCC1000.1097297356610668No Hit
ATTGCGCAATGAGGGCGGGGGAGGCAGTGCTGGCCGGAAGCCCCTCAAGT990.10863243830445612No Hit
ATTGCGCAATGCTGCGCCCGGGGAACACTATACCTATTATTCGGCGCATG980.10753514094784546No Hit
ATTGCGCAATGACTTAGAGGGGATGACCCCAATACGCAAAATTAACCCCC980.10753514094784546No Hit
ATTGCGCAATGCATGATCCGGGGGGGCATTCCTGAAGCTGACAGCATTCG980.10753514094784546No Hit
ATTGCGCAATGGGTGTGAGGGGGACTCGCTGCTGTGCCCATCTATCAGCA970.10643784359123479No Hit
ATTGCGCAATGGTATTGTAGGGCTGATGTTCGCCGACCGTTGACTATTCT970.10643784359123479No Hit
ATTGCGCAATGGTATGGGCGGGGGCGGCCGCTCGCCCCCTGTGGGGGCCT960.10534054623462412No Hit
ATTGCGCAATGATGGTTCTGGGATGACCCCAATACGCAAAATTAACCCCC960.10534054623462412No Hit
ATTGCGCAATGTCTATATAGGGCTGATGTTCGCCGACCGTTGACTATTCT960.10534054623462412No Hit
ATTGCGCAATGATGCACGTGGGGGGGGCTGTGGCAGTACGCGGGGACCCG950.10424324887801345No Hit
ATTGCGCAATGGTGCATAGGGGGAGCTTTAATTTATTAATGCAAACAGTA950.10424324887801345No Hit
ATTGCGCAATGTCCTAGACGGGATGGCAAGCCAACGCCACTTATCCAGTG940.1031459515214028No Hit
ATTGCGCAATGAGGCACTGGGGGTCTCTCGGCCTTAGCGCCATTTTTTTG940.1031459515214028No Hit
ATTGCGCAATGGTAGGCCTGGGCCGGAAAAAAAGAACCATTTGGATACAT940.1031459515214028No Hit
ATTGCGCAGTGGAGTGCAGGGGGAACTCGGTGGTGGCCACTGCGCAGACC930.10204865416479211No Hit
ATTGCGCAATGCCAGGGAGGGGGGGGCATTCCTGAAGCTGACAGCATTCG930.10204865416479211No Hit
ATTGCGCAATGAACCGGTTGGGAAGATAAAATTTGAAATCTGGTTAGGCT930.10204865416479211No Hit
ATTGCGCAATGCACCCATAGGGGTGAACCACTATCACGAAAAAAACTCTA920.10095135680818146No Hit
ATTGCGCAATGCATGCCACGGGGACGGCGGAGGCGGGGTTTCAGTGGCTT920.10095135680818146No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)