FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007822866

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822866
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences91133
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACTCTCTTCTAGTGTA7460.8185838280315583No Hit
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT5440.5969297619962033No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC3710.40709731930255777No Hit
GGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGG3090.3390648831926964No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACTCTCTTCTAGTGTT2750.3017567730679337No Hit
GAATTCATCCAATCCAAATGCGGCATCTTCAAACCTCCATGATGCTGCTT2510.27542163650927765No Hit
GAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGGG2180.2392108237411256No Hit
GTATTACTATGAAGAAGATTATTACAAATGCATGGGCTGTGACGATAACG1830.20080541625975223No Hit
GTGGAAGCAGCTCGCGTGTAGAACCAGTTCTCATCGTAGGGAGCAAGCTC1640.17995676648414954No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1620.1777621717709282No Hit
CATGGTTCACACGGCAGGCATACTCATCTTTTTCAGTGGGGGTGAATTCA1410.15471892728210418No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1370.1503297378556615No Hit
GGGTATTACTATGAAGAAGATTATTACAAATGCATGGGCTGTGACGATAA1270.13935676428955482No Hit
GCTTACATGTCTCGATCCCACTTAACTATCTTGGGCTGTGACAAAGTCAC1140.12509189865361614No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGACTCTCTTCTAGTGGA1140.12509189865361614No Hit
GTATATAGGCTGAGCAAGAGGTGGTGAGGTTGATCGGGGTTTATCGATTA1130.12399460129700547No Hit
CCACTATAGCAGATGCGAGCAGGAGTAGGAGAGAGGGAGGTAAGAGTCAG1060.1163135198007308No Hit
CTATAGCAGATGCGAGCAGGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAG1050.11521622244412012No Hit
CTTCAAACCTCCATGATGCTGCTTACATGTCTCGATCCCACTTAACTATC1040.11411892508750947No Hit
GGCGATTTCCCCCATGTCTGGTTTGTCTGCCATTTTCTTAAAACAATCCG1040.11411892508750947No Hit
CCTCTAGAGGGATATGAAGCACCGCCAGGTCCTTTGAGTTTTAAGCTGTG1010.11082703301767746No Hit
TTTTTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACTCTC1000.1097297356610668No Hit
GCGCAATCTGTCTCTTATACACATCTGACGCTGCCGACGACTCTCTTCTA990.10863243830445612No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)