FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822867

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822867
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3808
Sequences flagged as poor quality0
Sequence length151
%GC59

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCG1774.648109243697479No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCT1283.361344537815126No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1042.73109243697479No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC591.5493697478991597No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGAT310.814075630252101No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG260.6827731092436975No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATG220.5777310924369748No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA170.4464285714285714No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT170.4464285714285714No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAC160.42016806722689076No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT150.3939075630252101No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC140.3676470588235294No Hit
ATTGCGCAATGCTTGAGAGGGGGGGTCAGCGACTTAAAGTTACGAGCAAG110.2888655462184874No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCA100.26260504201680673No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT100.26260504201680673No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG100.26260504201680673No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG90.23634453781512604No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT90.23634453781512604No Hit
ATTGCGCAATGGGTCCGGGGGGAGTATGGTTGCAAAGCTGAAACTTAAAG90.23634453781512604No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC80.21008403361344538No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACT80.21008403361344538No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC80.21008403361344538No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC80.21008403361344538No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGCT70.1838235294117647No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT70.1838235294117647No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC70.1838235294117647No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCAGGAGACCCACTTATGGATCG70.1838235294117647No Hit
CGTCTGTTGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA70.1838235294117647No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT60.15756302521008403No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAC60.15756302521008403No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCTCG60.15756302521008403No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC60.15756302521008403No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT60.15756302521008403No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.15756302521008403No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCT60.15756302521008403No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGGTGCC60.15756302521008403No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG50.13130252100840337No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC50.13130252100840337No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCGG50.13130252100840337No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTCT50.13130252100840337No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG50.13130252100840337No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGAGCG50.13130252100840337No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT50.13130252100840337No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACGTATGGATCG50.13130252100840337No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACTTAT50.13130252100840337No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCG50.13130252100840337No Hit
ATTGCGCAATGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCACT40.10504201680672269No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGGT40.10504201680672269No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTCTCT40.10504201680672269No Hit
ATTGCGCAAAAAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGA40.10504201680672269No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT40.10504201680672269No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCT40.10504201680672269No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCACTTATGGATCG40.10504201680672269No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTTTGCTGCTG40.10504201680672269No Hit
ATTGCGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG40.10504201680672269No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGCTG40.10504201680672269No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)