FastQCFastQC Report
Tue 17 Jan 2023
EGAF00007822883

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822883
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9287
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3764.048670184128351No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCG3583.8548508668030577No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCT2462.6488640034456767No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1862.002799612361365No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA700.7537417895983634No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG570.6137611715300959No Hit
ATTGCGCAATGCAAATGCAGGGGGATTCGAGCCACCGGCCGAGCTGGTCG570.6137611715300959No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTAT460.49531603316463874No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCA410.4414773339076128No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGC400.43070959405620757No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT310.3337999353935609No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC310.3337999353935609No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT300.3230321955421557No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT300.3230321955421557No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG300.3230321955421557No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCG230.24765801658231937No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT220.2368902767309142No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG200.21535479702810378No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC190.20458705717669862No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCAC190.20458705717669862No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTC180.19381931732529342No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCA180.19381931732529342No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC180.19381931732529342No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCT170.18305157747388823No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC160.17228383762248303No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA150.16151609777107784No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAG150.16151609777107784No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCGATCG140.15074835791967267No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC140.15074835791967267No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG140.15074835791967267No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC130.13998061806826748No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT130.13998061806826748No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC130.13998061806826748No Hit
ATTGCGCAATGAGTCGTGTGGGGCAGCACGGGGAAGGAACGCGCGCGCAC130.13998061806826748No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATGG120.12921287821686228No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGT110.1184451383654571No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTAGCG110.1184451383654571No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG110.1184451383654571No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT110.1184451383654571No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTT100.10767739851405189No Hit
ATTGCGCAATATGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC100.10767739851405189No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTCTCG100.10767739851405189No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCGGT100.10767739851405189No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)