FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822885

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822885
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4205
Sequences flagged as poor quality0
Sequence length151
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2195.20808561236623No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1212.877526753864447No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCG1022.4256837098692032No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCT811.9262782401902496No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA501.1890606420927468No Hit
ATTGCGCAATGACATTTCGGGGGTGGAATTCCGAGTGTAGAGGTGAAATT370.8799048751486327No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG350.8323424494649228No Hit
ATTGCGCAATGAAAAGGCCGGGGGCCCAGACTCCTACGGGAGGCAGCAGT270.6420927467300832No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTCGGAGATCG240.5707491082045184No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAT230.5469678953626634No Hit
ATTGCGCAATGGGAAGAAGGGGGATCTATCATCAGTAGAGGTTTACTTAC200.47562425683709864No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC180.4280618311533888No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT170.40428061831153395No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGA170.40428061831153395No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGAT170.40428061831153395No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT150.356718192627824No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTCGGAGATCT140.3329369797859691No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA130.3091557669441141No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGTAGGAGATCG130.3091557669441141No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT110.2615933412604043No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT100.23781212841854932No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC90.2140309155766944No Hit
ATTGCGCAATGCTTGTGGGGGGGCGCGCGTAGGCGGTTTTTTAAGTCAGA90.2140309155766944No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC90.2140309155766944No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC80.1902497027348395No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAT80.1902497027348395No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG80.1902497027348395No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGTAGGAGATCT80.1902497027348395No Hit
ATTGCGCAATGTAACATGTGGGGGTAGAGTGCAGGGCCATTTTGGCGCTG80.1902497027348395No Hit
ATTGCGCAATGTCACTACCGGGCGGCTAACTCCGTGCCAGCAGCCGCGGT80.1902497027348395No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG80.1902497027348395No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC70.16646848989298454No Hit
ATTGCGCAATGACCTTCCCGGGGTGCGGTGTGGTGGCGGTGAGGGGCGCA70.16646848989298454No Hit
ATTGCGCAATGCTAGCTCGGGGGGATCGTAAAACTCTGTTATTAGGGAAG70.16646848989298454No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT70.16646848989298454No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC70.16646848989298454No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCTCG60.1426872770511296No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG60.1426872770511296No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCA60.1426872770511296No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT60.1426872770511296No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATGAGGAGATCG60.1426872770511296No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC60.1426872770511296No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATT60.1426872770511296No Hit
ATTGCGCAATGATGGGGGGGGGAGAGATGGGAGGATTGCTTGAGCTCAGG60.1426872770511296No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG50.11890606420927466No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC50.11890606420927466No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC50.11890606420927466No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCG50.11890606420927466No Hit
ATTGCGCAATCTGTCTCTTATACCTGGCTCTTATACACATCTCCGAGCCC50.11890606420927466No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGTCGGAGATCG50.11890606420927466No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)