FastQCFastQC Report
Tue 7 May 2024
EGAF00007822887

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822887
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6375
Total Bases962.6 kbp
Sequences flagged as poor quality0
Sequence length151
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAATCG3866.0549019607843135No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAATCT2413.780392156862745No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1702.666666666666667No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1302.03921568627451No Hit
ATTGCGCAATGGAGTATCAGGGGGGTAGAGCACTGAATGGGCTATGGGGA641.003921568627451No Hit
ATTGCGCAATGGACAAAGCGGGAGGCAACTGCAGATGACCTCATCAAAGT560.8784313725490196No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTT480.7529411764705882No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAAT460.7215686274509804No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGAAC420.6588235294117647No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG360.5647058823529412No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAAC250.39215686274509803No Hit
ATTGCGCAATGGAGGATGTGGGGGTTCCAGGAAATAGCCCCTCCATTATA250.39215686274509803No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAATCGCG210.32941176470588235No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAATCG160.25098039215686274No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT160.25098039215686274No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA150.2352941176470588No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG140.2196078431372549No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGGTAATCG140.2196078431372549No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGGTAATCT140.2196078431372549No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC140.2196078431372549No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT130.20392156862745098No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC130.20392156862745098No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA120.18823529411764706No Hit
ATTGCGCAATGTCTATGCAGGGAGTGTGATGTCGTACCTTTTGTAGAATG120.18823529411764706No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC110.17254901960784313No Hit
ATTGCGCAAGAAAAAAAGGAGGGTATAAGCGAGATCTGTTGCGGGCGGAA110.17254901960784313No Hit
ATTGCGCAATGAGGTCCTAGGGGTATAAAGAGGAAGGCTTAAATGCGTTC110.17254901960784313No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT110.17254901960784313No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACGAA100.1568627450980392No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAAGCG100.1568627450980392No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG100.1568627450980392No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT100.1568627450980392No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT90.1411764705882353No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAATCT90.1411764705882353No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC90.1411764705882353No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGT90.1411764705882353No Hit
ATTGCGCAATGCTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACA90.1411764705882353No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC80.12549019607843137No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT80.12549019607843137No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT80.12549019607843137No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACGAACAGGTTAATCTCG80.12549019607843137No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.12549019607843137No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT70.10980392156862745No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)