FastQCFastQC Report
Tue 7 May 2024
EGAF00007822891

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822891
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16121
Total Bases2.4 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC5923.672228769927424No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGCGCTTAGAATCG5493.4054959369766142No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGCGCTTAGAATCT4002.4812356553563673No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC3542.195893554990385No Hit
ATTGCGCAATGGAGTACTCGGGCCAGTCAACGTAACAACTGAAGTCAAGT3001.8609267415172757No Hit
ATTGCGCAATGTGGTCCAGGGGGCCTTTCCTTTCAGCGGCGCGCGGCTGC2981.848520563240494No Hit
ATTGCGCAATGGGTCTTGGGGGAAAAGGTGTGGGACTTATGGGGTCTACA1721.066931331803238No Hit
ATTGCGCAATGTCAGGGAGGGGCTGGGGCAGGCTCTCTCCTCTCTCTCTT1590.986291173004156No Hit
ATTGCGCAATGTTCGAAGCGGGCGAAGCGAAAGCGAGTCTTAATAGGGCG1470.911854103343465No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGCGCTTAG1150.7133552509149557No Hit
ATTGCGCAATGCATCTTGCGGGGCTTTTTTCCGGCGTTCAAGATGTCGAA890.5520749333167918No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT850.5272625767632281No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA830.5148563984864463No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC780.48384095279449163No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG760.47143477451770976No Hit
ATTGCGCAATGGCAGCAAGGGGGGAATCTGGTCAGTGTGTATAGGGGAAA710.44041932882575524No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT710.44041932882575524No Hit
ATTGCGCAATGGGTTGGGAGGGGATTGGGACGGTTTGTGTAGGATAGGTG620.384591526580237No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGCGCTTAGAAT620.384591526580237No Hit
ATTGCGCAATGGAGCAACCGGGGGTTAAGCGACTAAGCGTACACGGTGGA560.34737299174989145No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGCG540.33496681347310964No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC480.2977482786427641No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT450.2791390112275913No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC430.2667328329508095No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG410.25432665467402765No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT380.23571738725885488No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCGCGCTTAGAATCG380.23571738725885488No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG380.23571738725885488No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC380.23571738725885488No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG370.229514298120464No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC360.2233112089820731No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG350.21710811984368217No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGCGC340.21090503070529126No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT300.18609267415172756No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC280.17368649587494572No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA230.14267105018299112No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCGCGCTTAGAATCT220.1364679610446002No Hit
ATTGCGCAATGCTTAACCGGGGGCTCGCCGGCCGAGGTGGGATCCCGAGG210.13026487190620928No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGT200.12406178276781836No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCTT200.12406178276781836No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT200.12406178276781836No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT200.12406178276781836No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTGTC180.11165560449103655No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG180.11165560449103655No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGCGCTTA180.11165560449103655No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGCT170.10545251535264563No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)