FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007822908

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822908
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences224769
Sequences flagged as poor quality0
Sequence length151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGG4360.19397692742326567No Hit
GAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGGG3280.14592759677713565No Hit
GTATTACTATGAAGAAGATTATTACAAATGCATGGGCTGTGACGATAACG2740.12190293145407062No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGATAGTACGGAGGTGTA2460.10944569758285173No Hit
CTATAGCAGATGCGAGCAGGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAG2270.10099257459881034No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)