FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007822924

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822924
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137004
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTACACGCTGCTCTGGTGAGGCATTCCACCGGGGCAATTTCCTACCCGG2510.1832063297421973No Hit
GGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGG2390.17444746138798867No Hit
GAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGGG1530.1116755715161601No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)