FastQCFastQC Report
Tue 7 May 2024
EGAF00007822953

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822953
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6173
Total Bases932.1 kbp
Sequences flagged as poor quality0
Sequence length151
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3986.447432366758464No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1572.543333873319294No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCACCACGGATCG380.6155839948161348No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG330.5345861007613802No Hit
ATTGCGCAATGGACAAACAGGGCTTGAGAGTTTGATCCTGGCTCAGAGCG270.4373886278956747No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA250.4049894702737729No Hit
ATTGCGCAATGAATACAAGGGGGGAGTTATGAGGCTAGAGATGCCAGAAA230.37259031265187104No Hit
ATTGCGCAATGAACCTAGGGGGGAACTGAGAACCTGTCATGAGGATGCAA200.3239915762190183No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCACGGATCG180.29159241859711643No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCA170.2753928397861656No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCACG150.24299368216426373No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG150.24299368216426373No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCACGGAT120.194394945731411No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCACGGATCT110.17819536692046006No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT110.17819536692046006No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.16199578810950915No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCA100.16199578810950915No Hit
ATCTGTGGCTTATACACATCTCCGAGCCCACGAGACTTCACCACGGATCG90.14579620929855822No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT80.1295966304876073No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTC80.1295966304876073No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.1295966304876073No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCACCACGGAGCG80.1295966304876073No Hit
ATTGCGCAAACTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC70.1133970516766564No Hit
GGCTTAGGGCCGGGGGGGGCAAGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.1133970516766564No Hit
GCGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.1133970516766564No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)