FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822955

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822955
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5394
Sequences flagged as poor quality0
Sequence length151
%GC61

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3155.839822024471635No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1362.521319985168706No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG310.5747126436781609No Hit
ATTGCGCAATGCTTCAATAGGGAGGCAAGCTGCGGAGGGACGCAGTGAGG270.5005561735261401No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA230.4263997033741194No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACAACCATCGG190.3522432332220986No Hit
ATTGCGCAATGTATCCGGCGGGATTAAAGAGCATAAGAGTAATCCTGCAC180.33370411568409347No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACAACCATCGGCATCG170.3151649981460882No Hit
ATTGCGCAATGGAATCCTCGGGGGAGGTAAGGGAGTATTGATAAAAATCA160.29662588060808304No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACAACC140.25954764553207266No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG130.2410085279940675No Hit
ATTGCGCAATGGACTGGTGGGGGCAGAATTGACAAGCCTATCTTAAAGGC120.22246941045606228No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACAACCATCGGCATCG100.18539117538005193No Hit
ATTGCGCAATGCACTGGTTGGGGCTCTCTTCCTCGGCGCTGCCTACGGAG100.18539117538005193No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG100.18539117538005193No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT90.16685205784204674No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG90.16685205784204674No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACAACCATCGGCAT90.16685205784204674No Hit
ATCTGTGGCTTATACACATCTCCGAGCCCACGAGACAACCATCGGCATCG90.16685205784204674No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG90.16685205784204674No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC90.16685205784204674No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT80.14831294030404152No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT70.12977382276603633No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACAACCATCGGCAGCG60.11123470522803114No Hit
ATTGCGCAAACTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC60.11123470522803114No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)