FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822959

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822959
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2311
Sequences flagged as poor quality0
Sequence length151
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2239.649502379922112No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC672.8991778450887065No Hit
ATTGCGCAATGGGACTGCCGGGGACTGGGTAATTTATGAAGAAAAGAGGT180.7788836001730853No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA170.7356122890523582No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCG120.5192557334487236No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG100.4327131112072695No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGA90.38944180008654267No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCT50.21635655560363476No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGAT50.21635655560363476No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG50.21635655560363476No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCT50.21635655560363476No Hit
ATTGCGCAATATGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC50.21635655560363476No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT40.17308524448290782No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC40.17308524448290782No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAGTAGGAGATCG40.17308524448290782No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT40.17308524448290782No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGG40.17308524448290782No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC40.17308524448290782No Hit
ATTGCGCAATGATGACCTCGGGGGATCGTAAAACTCTGTTATTAGGGAAG40.17308524448290782No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATTGGGAGATCT30.1298139333621809No Hit
ATTGCGCAAACTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC30.1298139333621809No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCATTCGGAGATCG30.1298139333621809No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG30.1298139333621809No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAT30.1298139333621809No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC30.1298139333621809No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC30.1298139333621809No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.1298139333621809No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGATG30.1298139333621809No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGG30.1298139333621809No Hit
ATTGCGCAATGCTGGAAGGGGGAAGTTGTGTAGTGCGATCGGTGGATGCC30.1298139333621809No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAT30.1298139333621809No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCATTAGGAGATCG30.1298139333621809No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGC30.1298139333621809No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTG30.1298139333621809No Hit
GGGGGATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.1298139333621809No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)