FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007822965

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822965
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6411
Sequences flagged as poor quality0
Sequence length151
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3886.05209795663703No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1782.776477928560287No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG260.40555295585712053No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA230.3587583840274528No Hit
ATTGCGCAATGCTCGGCTCGGGGCAGTTACAACATCAAGTCGCGCTTCAC210.32756200280767434No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG180.28076743097800655No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCCATCACTATATCG140.21837466853844956No Hit
ATCTGTGGCTTATACACATCTCCGAGCCCACGAGACCCATCACTATATCG110.17158009670878177No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATCACTATAT100.15598190609889254No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAT100.15598190609889254No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC100.15598190609889254No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT80.12478552487911403No Hit
ATTGCGCAATGCTGGGTACGGGACGGTCCAGACTCCTACTGGAGGCAGCA80.12478552487911403No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.12478552487911403No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATCACTATATCG80.12478552487911403No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC80.12478552487911403No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.12478552487911403No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA70.10918733426922478No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATCACTA70.10918733426922478No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCATCACTATATCT70.10918733426922478No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG70.10918733426922478No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)