FastQCFastQC Report
Tue 7 May 2024
EGAF00007822973

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007822973
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1987
Total Bases300 kbp
Sequences flagged as poor quality0
Sequence length151
%GC69

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1778.907901358832412No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC562.8183190739808754No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG221.1071967790639154No Hit
ATTGCGCAATGCTGGCTCTGGGGAAACCTCTCTATTCAGCACTTCCTCTC80.40261701056869653No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.40261701056869653No Hit
ATTGCGCAATGCACTTGAGGGGTAATGGGTCAGTGACTTAGTGTAACAAG60.3019627579265224No Hit
ATTGCGCAATGGATCGGGGGGGGGAACTAGTACCGTGAGGGAAAGGTGAA60.3019627579265224No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC50.25163563160543534No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.25163563160543534No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.25163563160543534No Hit
ATTGCGCAATATGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC50.25163563160543534No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC40.20130850528434827No Hit
ATTGAGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC30.1509813789632612No Hit
ATTGCGCAATCTGTCTCTTATACACCAGTCTCTTATACACATCTCCGAGC30.1509813789632612No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.1509813789632612No Hit
ATTGCGCAATCTGTCTCTTATACCTGACTCTTATACACATCTCCGAGCCC30.1509813789632612No Hit
GCCCGCGGGCCGGGGGGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.1509813789632612No Hit
GGGGGCTGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
ATTGCGCAATCTGTCTCATATACCTGTCTCTTATACACATCTCCGAGCCC20.10065425264217413No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACAAATCTCCGAGC20.10065425264217413No Hit
GGCTTAGGGCCGGGGGGGGCAAGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
ATTGCGCAATGACAGGGGAGGGGAGAGACCCCACAGCTGGGGACACAGAG20.10065425264217413No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGATC20.10065425264217413No Hit
GGTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
GGGGTAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
GGGGTGTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
GGGCGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
GGGTGTTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT20.10065425264217413No Hit
GCCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
GGGGGAGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
GGGGGCTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
ATTGCGCAATCTGTCTCTTATACACACTGTCTCTTATACACATCTCCGAG20.10065425264217413No Hit
ATTGCGCAAACTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC20.10065425264217413No Hit
ATTGCGCAATCTGTCGCTTATACACCTGTCTCTTATACACATCTCCGAGC20.10065425264217413No Hit
GGGGGGTGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
GCGGGCGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
GGGGTCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
GGGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTATAGGTTG20.10065425264217413No Hit
GCGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
GCCCGCGGGCCGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
ATTGCGCAATCTGTCTATTATACACCTGTCTCTTATACACATCTCCGAGC20.10065425264217413No Hit
ATTGCGCAATCTGTCTCTTATACCTGGCTCTTATACACATCTCCGAGCCC20.10065425264217413No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.10065425264217413No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCGCTTATACACATCTCCGAGC20.10065425264217413No Hit
GGGGGATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
ATTGCGCAATGCGACCCCTGGGAACTCATTGCGCAATCTGTCTCTTATAC20.10065425264217413No Hit
GGGGGAGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit
ATTGCGCAATGGCTGGGGGGGGCCCAGAAATGAACCTTCTCATGGCCCCC20.10065425264217413No Hit
GCCGGCGGGCCGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.10065425264217413No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)