FastQCFastQC Report
Tue 7 May 2024
EGAF00007823017

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823017
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7092
Total Bases1 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCG2643.7225042301184432No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCT2193.0879864636209815No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA2032.862380146644106No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1802.5380710659898478No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC901.2690355329949239No Hit
ATTGCGCAATGTCCGTGCCGGGCGGGATGAAACAGGAGGTAGAAAAGGAG570.8037225042301184No Hit
ATTGCGCAATGTCTATACCGGGCGACGCAGCAGATGCTCCAGCTTATCTC520.7332205301748449No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG430.6063169768753526No Hit
ATTGCGCAATGCTGAGGTGGGGCCAGTCAAGAAAGAAAGGGCGCCAGGTG400.5640157924421884No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAAT390.5499153976311337No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCA370.5217146080090242No Hit
ATTGCGCAATGCGGGGACGGGGGAAGCAACGCGAAGAACCTTACCAAGTC350.4935138183869149No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGT310.43711223914269604No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT200.2820078962210942No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT200.2820078962210942No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG190.2679075014100395No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC190.2679075014100395No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC190.2679075014100395No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC190.2679075014100395No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT180.25380710659898476No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTC180.25380710659898476No Hit
ATTGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA180.25380710659898476No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA160.2256063169768754No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA150.21150592216582065No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA150.21150592216582065No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT140.19740552735476596No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG130.18330513254371122No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC130.18330513254371122No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG120.1692047377326565No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCG110.1551043429216018No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGC100.1410039481105471No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCGCG100.1410039481105471No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT90.12690355329949238No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAAGCG90.12690355329949238No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTGTCTGCAAATCT90.12690355329949238No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTGT90.12690355329949238No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT90.12690355329949238No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC80.1128031584884377No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT80.1128031584884377No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)