FastQCFastQC Report
Tue 17 Jan 2023
EGAF00007823025

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823025
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7760
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3013.8788659793814433No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1562.0103092783505154No Hit
ATTGCGCAATGTCGATCAGGGGGTTGTCCGGGGCTAAGTGTGTGGACTGT941.2113402061855671No Hit
ATTGCGCAATGGAAGTGAAGGGAGATGGTGAAAGTCGGGCACAGGAAGGC770.9922680412371133No Hit
ATTGCGCAATGTACCTGGCGGGTCCCAAATAACCATCGTCATGACTTACG680.8762886597938144No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA610.7860824742268041No Hit
ATTGCGCAATGCAGGACTCGGGGTGACGGTACCTAGATAAGAAGCACCGG540.6958762886597939No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGACACCGTAATCG510.6572164948453608No Hit
ATTGCGCAATGTATTGGTCGGGTGGATGGGTCATGCACATCCGGTGTATT450.5798969072164949No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG390.5025773195876289No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC360.4639175257731959No Hit
ATTGCGCAATGGGCAAGCCGGGGAAGGTTGAGGCATGATGGGGAGCCCAC290.37371134020618557No Hit
ATTGCGCAATGGGCGTCCGGGGAAGGTTGAGGCATGATGGGGAGCCCACG270.34793814432989695No Hit
ATTGCGCAATGGTGTCCACGGGGTACCTGAACCCACAGAGATTCTTAAGC260.33505154639175255No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACACCGTAATCG250.3221649484536082No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACACCGT230.2963917525773196No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACACCGTAATCT210.2706185567010309No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAC210.2706185567010309No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAC150.19329896907216496No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA150.19329896907216496No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGACACCGTAATCT140.18041237113402062No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACACCGTAAT140.18041237113402062No Hit
ATTGCGCAATGTGGGCAGGGGGATAGACCGTACCCTAAACCGACACAGGT130.16752577319587628No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG120.15463917525773196No Hit
ATTGCGCAATGAGCATCAAGGGGGAAACAGCCCAGACCACCAGCTAAGGT110.14175257731958762No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGACACCGTAAGCG110.14175257731958762No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA110.14175257731958762No Hit
ATTGCGCAATGAGTACATCGGGGGTTCAGTCAGAGAAGAGAAGAGGTCAA100.12886597938144329No Hit
ATTGCGCAATGGGAGACCGGGGAAGGTTGAGGCATGATGGGGAGCCCACG90.11597938144329897No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG90.11597938144329897No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT80.10309278350515465No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.10309278350515465No Hit
ATTGCGCAATGCTAGGACTGGGGGAGATACCGTCTGTGATCCATGGATCT80.10309278350515465No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC80.10309278350515465No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGG80.10309278350515465No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)