FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823029

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823029
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6584
Sequences flagged as poor quality0
Sequence length151
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2573.9034021871202915No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1281.9441069258809234No Hit
ATTGCGCAATGGACGCCCGGGGAAGTTTCCAAGGGCGCATGGTGGATGCC500.7594167679222357No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA320.48602673147023084No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC250.37970838396111783No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACCATGA220.33414337788578374No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG160.24301336573511542No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAATCG160.24301336573511542No Hit
ATTGCGCAATGTTACCCGCGGGGAAATACAACATCTTCCGAGCCCGCATC120.18226002430133656No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA120.18226002430133656No Hit
ATTGCGCAATGTTACCCGCGGAGAAATACAACATCTTCCGAGCCCGCATC120.18226002430133656No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAC120.18226002430133656No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAATCG110.16707168894289187No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA110.16707168894289187No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAAT110.16707168894289187No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC90.13669501822600244No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGG70.106318347509113No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAC70.106318347509113No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.106318347509113No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.106318347509113No Hit
ATCTGTGGCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAATCG70.106318347509113No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)