FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823033

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823033
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5477
Sequences flagged as poor quality0
Sequence length151
%GC58

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1452.64743472704035No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC911.6614935183494612No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTAGGCATC410.7485849917838233No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA410.7485849917838233No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTAGGCATCCATCG360.6572941391272594No Hit
ATTGCGCAATGTCTTACTAGGGAGGATAGGTGGGAGACTGTGAAGCTTAA250.456454263282819No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG210.383421581157568No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTAG200.36516341062625524No Hit
ATTGCGCAATGTACTGGGCGGGGCTTCTCCAGTGGGCCTGGAGAGTTTGT190.3469052400949425No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG150.2738725579696914No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC140.25561438743837867No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT140.25561438743837867No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTAGGCATCCATCG130.2373562169070659No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG120.21909804637575314No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTAGGCATCCAT110.20083987584444038No Hit
ATTGCGCAATGCGTGGCCGGGGTTGTGGGACATTACGTGGGGGATCTACC110.20083987584444038No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTAGGCATCCATCT110.20083987584444038No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.18258170531312762No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC100.18258170531312762No Hit
ATCTGTGGCTTATACACATCTCCGAGCCCACGAGACTTAGGCATCCATCG100.18258170531312762No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG90.16432353478181486No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT90.16432353478181486No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTAGGCATCCATGG90.16432353478181486No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA80.14606536425050212No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT70.12780719371918933No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTA70.12780719371918933No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTAG70.12780719371918933No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA70.12780719371918933No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.12780719371918933No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTG70.12780719371918933No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT60.10954902318787657No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTAGGCATCCATCT60.10954902318787657No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC60.10954902318787657No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA60.10954902318787657No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT60.10954902318787657No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)