FastQCFastQC Report
Tue 7 May 2024
EGAF00007823041

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823041
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9712
Total Bases1.4 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAATCG2622.697693574958814No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2142.2034596375617794No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAATCT1711.760708401976936No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1511.5547775947281712No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1191.2252883031301482No Hit
ATTGCGCAATGTTGACTGTGGGGAAAAGCCAACTAGAAAACAACTGGCGT800.8237232289950577No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCT790.8134266886326194No Hit
ATTGCGCAATGGGGGTTCAGGAATCCATGGAAGCAGTGCAAAGCGAAGCA730.7516474464579901No Hit
ATTGCGCAATGTCGACACCGGGGCGCGGCGCCTCGCCTCGGCCGGCGCCT670.6898682042833608No Hit
ATTGCGCAATGGAGCAGCAGGGGGGAGGCAGCAGTAGGGAATCTTCCGCA560.5766062602965404No Hit
ATTGCGCAATGGCATGGTAGGGAGGGTCGCGGTGCACGATGCACAGAAAA460.4736408566721581No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAATCG450.4633443163097199No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC420.43245469522240526No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT370.38097199341021415No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGC360.37067545304777594No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAAT340.3500823723228995No Hit
ATTGCGCAATGGAGACGGCGGGGGGGTGAAAGGCTAAACAAACTTGGAGA340.3500823723228995No Hit
ATTGCGCAATGTCTAGGATGGGGGCCGATGGACGACGCCCGAGCCGCGAG300.3088962108731466No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG290.2985996705107084No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC260.26771004942339377No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT240.2471169686985173No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA240.2471169686985173No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT220.22652388797364084No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAATCT190.19563426688632618No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA190.19563426688632618No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT190.19563426688632618No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCA160.16474464579901155No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA160.16474464579901155No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC140.1441515650741351No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG140.1441515650741351No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG140.1441515650741351No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGG130.13385502471169688No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG120.12355848434925865No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGC120.12355848434925865No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTCT120.12355848434925865No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC120.12355848434925865No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG120.12355848434925865No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCT120.12355848434925865No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTCATCG110.11326194398682042No Hit
ATTGCGCACTGGTGAATGTGGGAAAGCCTTTAGCCAGAATTCGGGGCTTA110.11326194398682042No Hit
ATTGCGCAATGTATGCTGCTGCTGTCTCTTATACACATCTCCGAGCCCAC110.11326194398682042No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGC110.11326194398682042No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT110.11326194398682042No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTG100.10296540362438221No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAATGG100.10296540362438221No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC100.10296540362438221No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG100.10296540362438221No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCTGCTG100.10296540362438221No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)