FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007823063

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823063
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10815
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC3813.522884882108183No Hit
ATTGCGCAATGCGGACTCGGGGGAAAAAATGAAGGCTGAAGATGGAGAGA2352.1729079981507167No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1861.7198335644937588No Hit
ATTGCGCAATGCAGAGCTGGGGGGTTCCAGGAAATAGCCCCTCCATTATA1441.331484049930652No Hit
ATTGCGCAATGTCCTCATCGGGGGGGAATATTGGACAATGGGCGAAAGCC900.8321775312066574No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA810.7489597780859917No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG480.4438280166435506No Hit
ATTGCGCAATGGCTTGTGGGGGGGCTGGAGAGATGGCTCAGTGGTTAAGA410.37910309754969945No Hit
ATTGCGCAATGTAACTCGTGGGGTGGCGGCGACGACCCATTCGAACGTCT370.34211742949607027No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTATGGCCT350.3236245954692557No Hit
ATTGCGCAATGGGCGGCAGGGGGAAACACAGCAGTTCTTGGTAAAGTCCT300.27739251040221913No Hit
ATTGCGCAATGTATAAGCTGGGTGAAGGTGCTCTTCGCCGCCGCCCTCAT220.2034211742949607No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC220.2034211742949607No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTATGGCCTTATCG200.18492834026814609No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTATGGCCTTAT200.18492834026814609No Hit
ATTGCGCAATGGACGTCACGGGCAGGCGATGAAGGACGTAGTAGCTTGCG200.18492834026814609No Hit
ATTGCGCAATGGCTAACTGGGGGAACCACGCATCCCTACGGTTGTTGAAT180.1664355062413315No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG180.1664355062413315No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTAT160.14794267221451687No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA140.12944983818770225No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTATGGCCTTATCG130.12020342117429496No Hit
ATTGCGCAATGCGGCGAAGGGGGAGGCGCGGGCGGCGGCACAGAGACGAG120.11095700416088765No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)