FastQCFastQC Report
Wed 8 May 2024
EGAF00007823076

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823076
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences531124
Total Bases80.1 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGATCTGCTTGTATTTATCTTTGAAGGCGAAGTTAAGAGCCTGGGTG8140.15325987904896032No Hit
GGATCACTTGGCCCTTTCTCTTCTTATCTCCTCCCAGTTCAAAATGCTTG7020.1321725246835014No Hit
GGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGG6760.12727724599151988No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGGAAGTGCCAGTGTA6110.11503904926156604No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)