FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007823079

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823079
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9585
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2442.5456442357850806No Hit
ATTGCGCAATGTGTGGCCCGGGATCGAAGCCCCGGTAAACGGCGGCCGTA1591.6588419405320816No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC1521.585811163275952No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA860.8972352634324465No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACGCTACTAATCG740.7720396452790819No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACGCTACTAATCG650.6781429316640584No Hit
ATTGCGCAATGCATCAGGGGGGCGTCGTGCCGGCGTTGGACCACTTGCGG650.6781429316640584No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACGCTACT510.5320813771517997No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACGCTACTAATCT300.3129890453834116No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC270.28169014084507044No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTACG260.2712571726656234No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACGCTACTAATCT250.2608242044861763No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG240.25039123630672927No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTACGCTACTAAT200.20865936358894105No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA200.20865936358894105No Hit
ATCTGTGGCTTATACACATCTCCGAGCCCACGAGACTACGCTACTAATCG170.17736045905059988No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG150.1564945226917058No Hit
ATTGCGCAATGGTTTGTCTGGGAGAGATTCTTGGAGGTAGAGCACTGTTT130.1356285863328117No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA110.11476264997391757No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT110.11476264997391757No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC110.11476264997391757No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTACGCTACTAAGCG100.10432968179447052No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT100.10432968179447052No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG100.10432968179447052No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)