FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823085

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823085
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2303
Sequences flagged as poor quality0
Sequence length151
%GC69

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC25110.898827616152843No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC974.2118975249674335No Hit
ATTGCGCAATGGCGTAACGGGGGATGTCCGAATGGGGAAACCCAGTGCAA321.3894919669995658No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG301.3026487190620928No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG140.60790273556231No Hit
ATTGCGCAATGAAGACGGTGGGGGTTCCAGGAAATAGCCCCTCCATTATA80.34737299174989145No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC70.303951367781155No Hit
ATTGCGCAATGGCTGGCAAGGGGATTGCACTCTGCAACTCGAGTGCATGA70.303951367781155No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.26052974381241856No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.26052974381241856No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.26052974381241856No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.26052974381241856No Hit
ATTGAGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC50.21710811984368217No Hit
GGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.21710811984368217No Hit
GGGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.21710811984368217No Hit
ATTGCGCAATATGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC50.21710811984368217No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTGATACACATCTCCGAGC40.17368649587494572No Hit
ATTGCGCAATCTGTCTCTTATACACCAGTCTCTTATACACATCTCCGAGC40.17368649587494572No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC40.17368649587494572No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGCTGATCG40.17368649587494572No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCCGTGCTGATCG30.13026487190620928No Hit
ATTGCGCAATCTGGCTCTTATACACCTGTCTCTTATACACATCTCCGAGC30.13026487190620928No Hit
GGGGTGTGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.13026487190620928No Hit
ATTGCGCAATCTGTCTCTAATACACCTGTCTCTTATACACATCTCCGAGC30.13026487190620928No Hit
ATTGCGCGTACGGCATCTCCGAGCCCACGAGACTTCCGTGCTGATCTCGT30.13026487190620928No Hit
ATTGCGCAAACTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC30.13026487190620928No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG30.13026487190620928No Hit
GCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.13026487190620928No Hit
GGGGGAGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.13026487190620928No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTGTTATACACATCTCCGAGC30.13026487190620928No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)