FastQCFastQC Report
Tue 7 May 2024
EGAF00007823093

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823093
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4311
Total Bases650.9 kbp
Sequences flagged as poor quality0
Sequence length151
%GC61

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1703.9434006031083277No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC791.8325214567385757No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG260.6031083275342148No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA220.5103224309904895No Hit
ATTGCGCAATGGGGTACGGGGGGGCCGCTGAGGGGATGAAGAGTTGGGGT170.3943400603108328No Hit
ATTGCGCAATGATGTTGAAGGGGCCAATCAAACCGGGAAATAGCTGGTTC150.3479471120389701No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.16237531895151935No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.16237531895151935No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC70.16237531895151935No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAATCG70.16237531895151935No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.16237531895151935No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTGACCATGAAATCG70.16237531895151935No Hit
ATTGCGCAATGTTCGCTCAGGGGGTTCCAGGAAATAGCCCCTCCATTATA60.13917884481558804No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC60.13917884481558804No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAC60.13917884481558804No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACCATGA60.13917884481558804No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG50.1159823706796567No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)