FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823099

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823099
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6366
Sequences flagged as poor quality0
Sequence length151
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGTGAAGCGATCG1422.2306000628338043No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1111.7436380772855797No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGTGAAGCGATCT761.1938422871504868No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC661.0367577756833177No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA530.8325479107759974No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTCGTGAAGCGATCG450.706880301602262No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG280.43983663210807417No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGTGAAGC260.4084197298146403No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC240.3770028275212064No Hit
ATTGCGCAATGCACCACCGGGGGAAATAGCCTCCACATTAGACCGTACCC240.3770028275212064No Hit
ATTGCGCAATGAGTTATCTGGGATGTATTCAGAGGCGCTGTTGCCATGGC220.34558592522777254No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGTGAAGCGAT220.34558592522777254No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGT210.3298774740810556No Hit
ATTGCGCAATGCACGTTTGGGGCAAGCTAATCTGCCCTGGGTAAGTCGGG170.2670436694941879No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTCGTGAAGCGATCT150.23562676720075398No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA150.23562676720075398No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA130.20420986490732015No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT120.1885014137606032No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC120.1885014137606032No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA110.17279296261388627No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG110.17279296261388627No Hit
ATTGCGCAATGGGCGGCCGGGGAGCTTCAGGAGGACAGCGGGCTGTGCGT110.17279296261388627No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT100.15708451146716934No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCAGGAGACTCGTGAAGCGATCG100.15708451146716934No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGTGAAGCGAGCG90.1413760603204524No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGTGAAGCGATCGCG90.1413760603204524No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCAGGAGACTCGTGAAGCGATCG80.12566760917373546No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC80.12566760917373546No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGTGAAGCGAGCT80.12566760917373546No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.10995915802701854No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG70.10995915802701854No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTCGTG70.10995915802701854No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC70.10995915802701854No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTCG70.10995915802701854No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)