FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823103

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823103
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4908
Sequences flagged as poor quality0
Sequence length151
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2094.258353708231459No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC971.9763651181744093No Hit
ATTGCGCAATGCCGCCAATGGGAACAATCCGCAGCGGCTTCTGAGCAGAT641.3039934800325998No Hit
ATTGCGCAATGACTCTAGTGGGGGTGAACAACGCCGAAATGGCCAAGATT480.9779951100244498No Hit
ATTGCGCAATGCAATTCCCGGGGGCGCTTGAGAGAACTGCGTTGAAGGAA430.8761206193969031No Hit
ATTGCGCAATGGGTCTCGGGGGTGACATTCAGACAAGGAGACACAGGCAA340.6927465362673186No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA270.5501222493887531No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG260.5297473512632437No Hit
ATTGCGCAATGTCAACCGGGGGTTATTTAGGGCGCATGGTGGATGCCTTG120.24449877750611246No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTGAT110.22412387938060307No Hit
ATTGCGCAATGCTGAGGGCGGGGATACTGATTCAGAAATCCTGTAGCGTG80.16299918500407498No Hit
CGTCTGTTGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA80.16299918500407498No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGATGGAGA80.16299918500407498No Hit
ATTGCGCAATGACTGTTTCGGGGGCACTAGGAGCCGATGAAGGACGTGAC70.14262428687856563No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.12224938875305623No Hit
ATTGCGCAATGAATACGGTGGGTGGCTAAACTGCATGCGTGTGATACCTG60.12224938875305623No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA60.12224938875305623No Hit
ATTGCGCAATGTACCAGGCGGGGGAGATGAAGATAGAAAAAAAAAAAGAA60.12224938875305623No Hit
ATTGCGCAATTCCGCCAATGGGAACAATCCGCAGCGGCTTCTGAGCAGAT50.10187449062754686No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.10187449062754686No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.10187449062754686No Hit
ATTGCGCAAACTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC50.10187449062754686No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)