FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007823112

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823112
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences174750
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG4830.27639484978540774No Hit
GGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGG2380.1361945636623748No Hit
GAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGGG2240.12818311874105867No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)