FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823115

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823115
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3339
Sequences flagged as poor quality0
Sequence length151
%GC63

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1474.40251572327044No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC591.766996106618748No Hit
ATTGCGCAATGAGCACGCGGGGCGGGTGAAAACAAGTGGACATGCCCTAC240.7187780772686434No Hit
ATTGCGCAATGCCTCTACTGGGGTGAGAAATGTTGCGTGAAGGTGAAGCG190.5690326445043427No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG150.44923629829290207No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA150.44923629829290207No Hit
ATTGCGCAATGTTAAGCACGGGCGGCGCAGATCTACATTCTGACGAAGGA150.44923629829290207No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG130.3893381251871818No Hit
ATTGCGCAATGGATTCTATGGGAGTGTTCGAGTTGTAATTTGAAGAAGGT90.2695417789757413No Hit
GGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.20964360587002098No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.17969451931716085No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.17969451931716085No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.1497454327643007No Hit
ATTGCGCAATCTGTCTCCTGTCTCTTATACACATCTCCGAGCCCACGAGA50.1497454327643007No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA50.1497454327643007No Hit
GCCCGGGGGCCGGGGGGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.1497454327643007No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC50.1497454327643007No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT40.11979634621144056No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTAGCTCCAGAATCG40.11979634621144056No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)