FastQCFastQC Report
Tue 7 May 2024
EGAF00007823145

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823145
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14994
Total Bases2.2 Mbp
Sequences flagged as poor quality0
Sequence length151
%GC55

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATATCG6284.188342003468054No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATATCT4503.0012004801920766No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA3272.180872348939576No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC2851.9007603041216488No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2431.6206482593037215No Hit
ATTGCGCAATGAGAACCTAGGGACGGGATGGGCTACACACGTGCTACAAT1250.8336668000533547No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTA1010.6736027744431106No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG780.5202080832332933No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATAT780.5202080832332933No Hit
ATTGCGCAATGGGGAGCAGGGGACAATGAGGACGACGAAGAACAGAAATC770.5135387488328664No Hit
ATTGCGCAATGTCAGGGGGGGGGGTGCTTCTTCCGACGACGATGGCAGCA750.5002000800320128No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC640.42683740162731754No Hit
ATTGCGCAATGCTGAGCACGGGAGTTCAAGACCAGCCTGGGCAACACAGG600.4001600640256103No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC550.36681339202347607No Hit
ATTGCGCAATGCTGAGTACGGGAGTTCAAGACCAGCCTGGGCAACACAGG520.3468053888221956No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCC500.33346672002134187No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA500.33346672002134187No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT480.3201280512204882No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATATCG430.286781379218354No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA410.27344271041750035No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT410.27344271041750035No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT360.24009603841536614No Hit
ATTGCGCAATGTATGCTGCTGATGCTCGTCGTATGCTGCTGATGCTCGTC350.2334267040149393No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA310.20674936641323197No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCC310.20674936641323197No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC290.19341069761237828No Hit
ATTGCGCAATGGACACCGGGGGGCTCCTAGGCTGCACACCTGTACAGCAT280.18674136321195145No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG260.1734026944110978No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC240.1600640256102441No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCTATATCGCG220.14672535680939042No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT220.14672535680939042No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG210.1400560224089636No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT190.1267173536081099No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC180.12004801920768307No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCT180.12004801920768307No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCCAGCT180.12004801920768307No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC180.12004801920768307No Hit
ATTGCGCAATGGACAGAAGGGGGGATAACCTGTAGAATTAATAATAGGGG180.12004801920768307No Hit
ATTGCGCAATGCGGGCACGGGGGATTGCACTCTGCAACTCGAGTGCATGA170.11337868480725624No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG160.10670935040682938No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGCTGTCTCTTA160.10670935040682938No Hit
ATTGCGCAATGGGGACTTAGGGTGGTGTCCCAAAAACACTCAGCTGTTCC150.10004001600640257No Hit
ATTGCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA150.10004001600640257No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTC150.10004001600640257No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG150.10004001600640257No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG150.10004001600640257No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)