FastQCFastQC Report
Tue 7 May 2024
EGAF00007823155

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823155
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4249
Total Bases641.5 kbp
Sequences flagged as poor quality0
Sequence length151
%GC65

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC52612.379383384325724No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2114.965874323370205No Hit
ATTGCGCAATGTTCCGGGCGGGGGGCAATGGAAACTAAGAAAAAGACTAG571.341492115791951No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG501.1767474699929397No Hit
ATTGCGCAATGGCCGAAGGGGGCTGGAAAGTCGGGCAAGAATGGGTGACA461.0826076723935045No Hit
ATTGCGCAATGGAGGATGGGGGCCCACAGCCTTACTGAGTCTAAGCAAAC170.40009413979759945No Hit
ATTGCGCAATGTATCAGACGGGATTCCAACGCCGGCAGCATGGCCAAGCT170.40009413979759945No Hit
ATTGCGCAATGGGACTGACGGGAAGGTTTTCCAGTTTCTTAATGCAAAAT130.3059543421981643No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC120.2824193927983055No Hit
ATTGCGCAATCTGTCTCTTATACCTGGCTCTTATACACATCTCCGAGCCC110.2588844433984467No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA110.2588844433984467No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.2353494939985879No Hit
CGTCTGTTGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA100.2353494939985879No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG70.16474464579901155No Hit
ATTGCGCAATCTGTCTCTTATACACCGGTCTCTTATACACATCTCCGAGC60.14120969639915276No Hit
GGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG60.14120969639915276No Hit
ATTGCGCAATGGGCCTGGTGGGGGCAGAATTGACAAGCCTATCTTAAAGG60.14120969639915276No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCGCTTATACACATCTCCGAGC60.14120969639915276No Hit
ATTGCGCAAACTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC50.11767474699929395No Hit
ATTGCGCAATCTGTCTCTTATACACCTGACTCTTATACACATCTCCGAGC50.11767474699929395No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.11767474699929395No Hit
GCGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.11767474699929395No Hit
ATTGCGCAATGGACGTTGGGGGAAAATCGGAAGGGCAAATAAACCTAGCT50.11767474699929395No Hit
ATTGCGCAATGACAACGACGGGAGAAAAAACAAACACAAAAAAAAAAGAA50.11767474699929395No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCGCTTATACACATCTCCGAGCCC50.11767474699929395No Hit
ATTGCGCAATATGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC50.11767474699929395No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)