FastQCFastQC Report
Wed 18 Jan 2023
EGAF00007823157

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823157
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12633
Sequences flagged as poor quality0
Sequence length151
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCG5954.7098868044011715No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCT4233.34837330800285No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC4183.308794427293596No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC2952.335153961845959No Hit
ATTGCGCAATGCTGGATAGGGGTCGGGTTACCGAATTCAGACAAACTCCG2411.9077020501860207No Hit
ATTGCGCAATGCGAGTACCGGGTAGGCTTTCAAAATAAGGATGACTTTAG1190.9419773608802343No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1080.8549038233198766No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTAT790.625346315206206No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG740.5857674344969525No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGC690.5461885537876989No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC570.4511992400854904No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCA550.435367687801789No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT490.3878730309506847No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT410.32454682181587907No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG380.3007994933903269No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT360.28496794110662554No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCTC340.2691363888229241No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCG320.2533048365392227No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCT290.22955750811367057No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA290.22955750811367057No Hit
ATTGCGCAATCCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCAC290.22955750811367057No Hit
ATTGCGCAATGGATTCCACGGGGGGAGAAAAACTAAGAGAATATAAGACA280.22164173197181986No Hit
ATTGCGCAATGGGTGGACGGGGGCGGGGCGGGTGGATCATGAGGTCAGGA270.21372595582996914No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGC210.16623129897886488No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTG210.16623129897886488No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG200.15831552283701417No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAG200.15831552283701417No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTAGCG190.15039974669516346No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCT190.15039974669516346No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACTTC190.15039974669516346No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGAT180.14248397055331277No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCC170.13456819441146206No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTG170.13456819441146206No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC170.13456819441146206No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG170.13456819441146206No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGT160.12665241826961135No Hit
CTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATCGCG160.12665241826961135No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCACCAGCTATGG150.11873664212776064No Hit
ATTGCGCAATGGCCAGGTTGGGGAAGAAGGACGTGACAAACGACGATATG150.11873664212776064No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTGT150.11873664212776064No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTGT150.11873664212776064No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCCTGTC150.11873664212776064No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC150.11873664212776064No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCGGT140.11082086598590993No Hit
ATTGCGCAATGTCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTCA130.1029050898440592No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA130.1029050898440592No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)