FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823159

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823159
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1454
Sequences flagged as poor quality0
Sequence length151
%GC73

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1429.766162310866575No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC221.5130674002751032No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG110.7565337001375516No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.6877579092159559No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA60.41265474552957354No Hit
GGCTGTGGGGTGGGGGGGTCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.2751031636863824No Hit
ATTGCGCAATGGGAGGCAAGGGACCCATCCTAGGCCCGCTTTCTTGCCGA40.2751031636863824No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.2751031636863824No Hit
GCGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.20632737276478677No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.20632737276478677No Hit
CGTCTGTTGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA30.20632737276478677No Hit
GGCTGTGGGGTGGGGGGGTCTCCGGGGGGGGGGGGGGGGGGGGGGGGGGG30.20632737276478677No Hit
GGGGGATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.20632737276478677No Hit
GGGGGCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.20632737276478677No Hit
GGGTTTTGGCGGGGGGGGGCGCGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.20632737276478677No Hit
ATTGCGCAATATGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC30.20632737276478677No Hit
GCCCGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1375515818431912No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTATCTTATACACATCTCCGAGC20.1375515818431912No Hit
ATTGCGCAATCTGTCTCTTATACACATGTCTCTTATACACATCTCCGAGC20.1375515818431912No Hit
GGGCGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1375515818431912No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGGCTCTTATACACATCTCCG20.1375515818431912No Hit
GGGGTGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1375515818431912No Hit
GGCCTAGGGCAGGGGGGGGCCAGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1375515818431912No Hit
ATTGCGCAATCTGTCTCGTATACACCTGTCTCTTATACACATCTCCGAGC20.1375515818431912No Hit
GGGGGAGGGCAGGGGGGGGAAAGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1375515818431912No Hit
ATTGCGCAATCTGTCTCTTATACACCTGGCTCTTATACACATCTCCGAGC20.1375515818431912No Hit
ATTGCGCAATGACTCAGCAGGGTGTGGTGGCTCATGCCTGTAATCCCAGC20.1375515818431912No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCATGAGACTGACACCGTAATCT20.1375515818431912No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCAGAGC20.1375515818431912No Hit
GGTGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1375515818431912No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACACCGTAATCG20.1375515818431912No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTGACACCGTAATCT20.1375515818431912No Hit
ATTGCGCAATGGGCACGTAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAA20.1375515818431912No Hit
ATTGCGCAAGCAGAAGACGGCATACGAGATTCTGAACTGTGACTGGAGTT20.1375515818431912RNA PCR Primer, Index 40 (96% over 29bp)
ATTGCGCAATCTGTCTCTTATACACCTGACTCTTATACACATCTCCGAGC20.1375515818431912No Hit
GCGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1375515818431912No Hit
GGGGTAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1375515818431912No Hit
GGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1375515818431912No Hit
GGGCGCTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1375515818431912No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGATCCC20.1375515818431912No Hit
GCCCGCGGGCCGGGGGGGGCCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1375515818431912No Hit
GGGGGCTGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.1375515818431912No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)