FastQCFastQC Report
Tue 7 May 2024
EGAF00007823160

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823160
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1454
Total Bases219.5 kbp
Sequences flagged as poor quality0
Sequence length151
%GC68

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCT19113.13617606602476No Hit
GTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACGCTGC443.0261348005502064No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGG191.3067400275103165No Hit
GATGTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGAC151.031636863823934No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGGGGGGGGGGGG140.9628610729023385No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGGGG130.8940852819807428No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGGGGGGGGGGGG130.8940852819807428No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGGGG110.7565337001375516No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTG110.7565337001375516No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT100.6877579092159559No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTGGGGGGGGGGG100.6877579092159559No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGGGGGGG90.6189821182943603No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTGGG80.5502063273727648No Hit
ATCTGTCTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGT80.5502063273727648No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGTGGGGGGGGGGG60.41265474552957354No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGTAGATCTCGGTGGTCGCC60.41265474552957354Illumina RNA PCR Primer (96% over 29bp)
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGG50.34387895460797796No Hit
ATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT50.34387895460797796No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGC50.34387895460797796No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTGGTGGG40.2751031636863824No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT40.2751031636863824No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGTGGG40.2751031636863824No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTTGTG40.2751031636863824No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGGGGG40.2751031636863824No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGTGGGTGGGGGGG40.2751031636863824No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGTAGATCTCGG40.2751031636863824Illumina RNA PCR Primer (95% over 21bp)
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGTGGGGGG40.2751031636863824No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGTAGATCTCGGTGG30.20632737276478677Illumina RNA PCR Primer (95% over 24bp)
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTGGGGGG30.20632737276478677No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGGGGGTGGGGGGG30.20632737276478677No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGTGGGGGGGGGGG30.20632737276478677No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGGGGG30.20632737276478677No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGGGGGGGG30.20632737276478677No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTTGTC30.20632737276478677No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.20632737276478677No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTGGTGGGTGGGGGGG30.20632737276478677No Hit
CGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT30.20632737276478677No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTGGTGGGGGGGGGGG30.20632737276478677No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGGGGGGG30.20632737276478677No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTGGGGGGGGGGGGGG30.20632737276478677No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTTGGGGG30.20632737276478677No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGC30.20632737276478677No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGGGGG30.20632737276478677No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGGGGGGGG30.20632737276478677No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGTGGGGGG30.20632737276478677No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGATGTG20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGGGGGGGGGGGGG20.1375515818431912No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGTGGGGGG20.1375515818431912No Hit
GTGTATAAGAGACCGATTGCGCAATCTGTCTCTTATACACATCTGACGCT20.1375515818431912No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGTAGATCTC20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGGGGTGGGGGGG20.1375515818431912No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGGGGGGGGTGGGG20.1375515818431912No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGCGGGGG20.1375515818431912No Hit
CATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.1375515818431912No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGTTGTTGGCGG20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTTGTGGGGGGGGGGG20.1375515818431912No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTGGGGGGGGG20.1375515818431912No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTTGTG20.1375515818431912No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGCGG20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGTGGGTGGGGGGGGGGGGC20.1375515818431912No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGTGGGTGG20.1375515818431912No Hit
CAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAA20.1375515818431912No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGGCGG20.1375515818431912No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGTGGG20.1375515818431912No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGTATATCTCGGTGT20.1375515818431912No Hit
GCATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.1375515818431912No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGTG20.1375515818431912No Hit
GCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCGCAATGTGT20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGCGGGGGGGGGC20.1375515818431912No Hit
GTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGCGGGGGGGGGG20.1375515818431912No Hit
GCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT20.1375515818431912No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGTGGG20.1375515818431912No Hit
CAGCAGCATACATTGCGCAATCTGTCTCTTATACACATCTGACGCTGCCG20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGGGTGGGTGGGGGGG20.1375515818431912No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGTGGGGGTG20.1375515818431912No Hit
ATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTGGGGGG20.1375515818431912No Hit
ATGTGTATAAGAGACAGATTGCGCAATCTGTCTCTTATACACATCTGACG20.1375515818431912No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGGGTGGG20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGGCGGGGGGGGGG20.1375515818431912No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTTGTGGG20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTCGGGGGGGGGGGG20.1375515818431912No Hit
CATCAGCAGCATACGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGC20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTGGTCGGGGGGGGGG20.1375515818431912No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTC20.1375515818431912No Hit
GTCTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGTGG20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTCGGGGGGGGGG20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGTCGGGGGGGGGC20.1375515818431912No Hit
CATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGGGGTGGGGGGGGGGG20.1375515818431912No Hit
GTCTTGCTCTGTTGCACAGGCTGGAGTGCAGTGGTGCAGTCTCGGCTCAC20.1375515818431912No Hit
TCTGTCTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGG20.1375515818431912No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGTGGG20.1375515818431912No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTGGTGGG20.1375515818431912No Hit
CTCTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGGGGGGTG20.1375515818431912No Hit
CTTATACACATCTGACGCTGCCGACGAGGCTCAGAACGTGGTGTTGTAGG20.1375515818431912No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)