FastQCFastQC Report
Mon 16 Jan 2023
EGAF00007823165

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823165
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2019
Sequences flagged as poor quality0
Sequence length151
%GC67

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1447.13224368499257No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC512.526002971768202No Hit
ATTGCGCAATGGCTCCGCGGGGAACTATAGTATAAGTTTGAAATTTCGGT251.2382367508667658No Hit
ATTGCGCAATGCGGTCAATGGGCTGGAAGTTCCCAAGCTGAAGGTGTGTG231.1391778107974244No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG231.1391778107974244No Hit
ATTGCGCAATGAGGAAGGGGGGGGACCAACAAAACCAAACAAAGGGAGAA211.040118870728083No Hit
ATTGCGCAATGGGCCTGGTGGGATTCGTGGGCCTGGAGGTGTGTGACGGA180.8915304606240713No Hit
GGGGTGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG100.49529470034670625No Hit
ATTGCGCAATGTTCTCTGTGGGGCCTTTCTGACCCTTTCCGGGCGTTCAA80.396235760277365No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG50.24764735017335313No Hit
GGGGGTTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.1981178801386825No Hit
GGGGGGTGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG40.1981178801386825No Hit
CGTCTGTTGTGTATAAGAGACAGATTGCGCAAAAAAAAAAAAAAAAAAAA40.1981178801386825No Hit
ATTGCGCAATGTTCTGGCCGGGGACAAGGTCAAGATCACGATTATGTTCC30.1485884101040119No Hit
GGCTGTGGGGTGGGGGGGGCTCGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.1485884101040119No Hit
GCGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.1485884101040119No Hit
GGGGTCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG30.1485884101040119No Hit
ATTGCGCAATGCAAAGGAGGGGACTGAAAGACATGGCTCTGGAAGATGTG30.1485884101040119No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA30.1485884101040119No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACTTAGGCATCCATCT30.1485884101040119No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)