FastQCFastQC Report
Tue 17 Jan 2023
EGAF00007823175

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823175
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7709
Sequences flagged as poor quality0
Sequence length151
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAATCG1371.7771435983914903No Hit
ATTGCGCAATCTGTCTCTTATACACCTGTCTCTTATACACATCTCCGAGC1291.6733687897262939No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAATCG861.1155791931508625No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAATCT811.0507199377351149No Hit
ATTGCGCAATCTGTCTCTTATACCTGTCTCTTATACACATCTCCGAGCCC791.0247762355688157No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA781.0118043844856661No Hit
ATTGCGCAATGGCGCACAAGGGGAAAAGGTCTTGGATGACGTGTGGCTAG650.8431703204047217No Hit
ATTGCGCCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCT550.7134518095732261No Hit
ATTGCGCAATGGTAGCGATGGGAGCTCACTAGTCAAGTGACTCTGCGCCG390.5059021922428331No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTG390.5059021922428331No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAATCT360.4669866389933844No Hit
ATTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAAT330.42807108574393565No Hit
ATTGCGCAATGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAGAC260.33726812816188867No Hit
ATTGCGCAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGC220.2853807238292904No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTC200.2594370216629913No Hit
ATTGCGCAATGTATGCTGCCTGTCTCTTATACACATCTCCGAGCCCACGA170.22052146841354264No Hit
ATTGCGCAATGTCTTGACGGGGCAAACAAGAGAAAAAGAGAAGAGAGGGA140.1816059151640939No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGA140.1816059151640939No Hit
ATTGCGCAATCTGTCTCTTATACACATCCTGTCTCTTATACACATCTCCG140.1816059151640939No Hit
ATTGCGCAATGCGAAGCTCGGGAAGGGCGCATGGTGGATGCCTTGGCAAC140.1816059151640939No Hit
ATTGCGCAATGTATGCTCTGTCTCTTATACACATCTCCGAGCCCACGAGA140.1816059151640939No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGT140.1816059151640939No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCTGTCT130.16863406408094433No Hit
ATTGCGCAAAAAACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGG130.16863406408094433No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCT120.15566221299779479No Hit
ATCTGTGGCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAATCG120.15566221299779479No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAAGCG120.15566221299779479No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAATGG110.1426903619146452No Hit
ATCTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTCATCG110.1426903619146452No Hit
ATTGCGCAATGCGAAGTGGGGGGGGCTGGTGAGATGGCTCAGTGGGTAAG110.1426903619146452No Hit
ATTGCGCAATGCGTATGCCTGTCTCTTATACACATCTCCGAGCCCACGAG100.12971851083149566No Hit
ATTGCGCAATGGTATGAGGGGGCAGAAGCAGTTAAGAAACCAGCAGCTAA100.12971851083149566No Hit
ATTGCGCACTGTCTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGC100.12971851083149566No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCCTG90.1167466597483461No Hit
ATCTGTGTCTTATACACATCTCCGAGCCCACGAGACCGGCAAGCTAATGG90.1167466597483461No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAGTATGCTGCTG90.1167466597483461No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCTGCTGC80.10377480866519652No Hit
GGGGGCTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG80.10377480866519652No Hit
ATTGCGCAATGTCACGGTCGGGGGGCGCCGGCGGCTTTGGTGACTCTAGA80.10377480866519652No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGTATGCCTG80.10377480866519652No Hit
ATTGCGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCGTATGCCGGTC80.10377480866519652No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)