FastQCFastQC Report
Thu 19 Jan 2023
EGAF00007823184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007823184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81040
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10011.235192497532083No Hit
GGAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGG1480.18262586377097728No Hit
CCACTGTCGGTACGGTGTGCTGTCGATGAGCACGATGCAATTCTTCACCA1410.17398815399802567No Hit
GGATCACTTGGCCCTTTCTCTTCTTATCTCCTCCCAGTTCAAAATGCTTG1110.13696939782823297No Hit
GAGTAGGAGAGAGGGAGGTAAGAGTCAGAAGCTTATGTTGTTTATGCGGG1050.12956564659427444No Hit
CCACTATAGCAGATGCGAGCAGGAGTAGGAGAGAGGGAGGTAAGAGTCAG860.10612043435340572No Hit
TTCCAGAGCCACATCATCGCGGTCGAAATAGAAGCCCAGAGAGAGGTAGG830.10241855873642645No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)